نتایج جستجو برای: aflps

تعداد نتایج: 280  

Journal: :BioTechniques 2000
J H Leamon A Moiseff J F Crivello

A method is described that uses the ABI PRISM 310 genetic analyzer in conjunction with custom-designed software to identify and classify RAPD products. This methodology will also work well with AFLPs and microsatellite analyses. The methodology uses the ABI PRISM 310's high-throughput (> 500 samples per week) capabilities and in-lane molecular weight standards to efficiently separate and size D...

2011
Branko Kokotovic Øystein Angen Magne Bisgaard

Genetic diversity detected by analysis of amplified fragment length polymorphisms (AFLPs) of 54 Actinobacillus lignieresii isolates from different hosts and geographic localities is described. On the basis of variances in AFLP profiles, the strains were grouped in two major clusters; one comprising strains isolated from horses and infected wounds of humans bitten by horses and another consistin...

2010
Katharina E. Bardy Dirk C. Albach Gerald M. Schneeweiss Manfred A. Fischer Peter Schönswetter

Southeastern Europe is a centre of European biodiversity, but very little is known about factors causing the observed richness. Here, we contribute to fill this gap by reconstructing the spatio-temporal diversification of the cytologically variable and taxonomically intricate complex of Veronica chamaedrys (Plantaginaceae s.l.), growing in open forests, forest edges and grasslands, with flow cy...

Journal: :Genetics 2000
K Naruse S Fukamachi H Mitani M Kondo T Matsuoka S Kondo N Hanamura Y Morita K Hasegawa R Nishigaki A Shimada H Wada T Kusakabe N Suzuki M Kinoshita A Kanamori T Terado H Kimura M Nonaka A Shima

We mapped 633 markers (488 AFLPs, 28 RAPDs, 34 IRSs, 75 ESTs, 4 STSs, and 4 phenotypic markers) for the Medaka Oryzias latipes, a teleost fish of the order Beloniformes. Linkage was determined using a reference typing DNA panel from 39 cell lines derived from backcross progeny. This panel provided unlimited DNA for the accumulation of mapping data. The total map length of Medaka was 1354.5 cM a...

Journal: :Environmental pollution 2010
J Andre R A King S R Stürzenbaum P Kille M E Hodson A J Morgan

A Pb-mine site situated on acidic soil, but comprising of Ca-enriched islands around derelict buildings was used to study the spatial pattern of genetic diversity in Lumbricus rubellus. Two distinct genetic lineages ('A' and 'B'), differentiated at both the mitochondrial (mtDNA COII) and nuclear level (AFLPs) were revealed with a mean inter-lineage mtDNA sequence divergence of approximately 13%...

Journal: :Mycologia 2004
Ignacio H Chapela Matteo Garbelotto

Matsutake are commercially important ectomycorrhizal basidiomycetes in the genus Tricholoma. Despite their importance, the systematics of this species complex have remained elusive and little is known about their origin and biogeography. Using DNA analyses on a worldwide sample of matsutake, we present here the first comprehensive definition of natural groupings in this species complex. We infe...

Journal: :Molecular phylogenetics and evolution 2007
Mark P Simmons Li-Bing Zhang Colleen T Webb Kai Müller

AFLPs (and to a lesser extent ISSRs and RAPDs) are increasingly being used for phylogenetic inference among closely related species. Presence/absence characters for each AFLP allele treat all absences as homologous to one another. With three or more alleles, terminals are grouped by their shared absence of alleles in character-based phylogenetic-inference methods in a manner that is not redunda...

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