Different genes often have different phylogenetic histories. Even within regions having the same phylogenetic history, the mutation rates often vary. We investigate the prospects of phylogenetic reconstruction when all the characters are generated from the same tree topology, but the branch lengths vary (with possibly different tree shapes). Furthering work of Kolaczkowski and Thornton (2004, N...

In many data mining applications, it is a priori known that the target function should satisfy certain constraints imposed by, for example, economic theory or a human-decision maker. In this paper we consider partially monotone prediction problems, where the target variable depends monotonically on some of the input variables but not on all. We propose a novel method to construct prediction mod...

We propose Dirichlet Process mixtures of Generalized Linear Models (DP-GLM), a new class of methods for nonparametric regression. Given a data set of input-response pairs, the DP-GLM produces a global model of the joint distribution through a mixture of local generalized linear models. DP-GLMs allow both continuous and categorical inputs, and can model the same class of responses that can be mo...

liquid-liquid equilibria for the (water + lactic acid + benzyl alcohol or p-xylene) ternary systems were investigated at atmospheric pressure and in the temperature range from 298.15-318.15 k. the studied systems exhibit two types of liquid-liquid equilibrium (lle) behavior. the system consisting of benzyl alcohol displays type-1 lle behavior, while a type-2 behavior is exhibited by the other s...

In the general classification context the recourse to the so-called Bayes decision rule requires to estimate the class conditional probability density functions. In this paper we propose a mixture model for the observed variables which is derived by assuming that the data have been generated by an independent factor model. Independent factor analysis is in fact a generative latent variable mode...

Marginal independence constraints play an important role in learning with graphical models. One way of parameterizing a model of marginal independencies is by building a latent variable model where two independent observed variables have no common latent source. In sparse domains, however, it might be advantageous to model the marginal observed distribution directly, without explicitly includin...

In some situations, the distribution of the error terms of a multivariate linear regression model may depart from normality. This problem has been addressed, for example, by specifying a different parametric distribution family for the error terms, such as multivariate skewed and/or heavy-tailed distributions. A new solution is proposed, which is obtained by modelling the error term distributio...

The use of higher-order polynomial acoustic features can improve the performance of automatic speech recognition. However, the dimensionality of the polynomial representation can be prohibitively large, making the training of acoustic models using polynomial features for large vocabulary ASR systems infeasible. This paper presents an iterative polynomial training framework for acoustic modeling...