نتایج جستجو برای: linkage disequilibrium

تعداد نتایج: 55581  

Journal: :Genetics 2012
E Schaper A Eriksson M Rafajlovic S Sagitov B Mehlig

To model deviations from selectively neutral genetic variation caused by different forms of selection, it is necessary to first understand patterns of neutral variation. Best understood is neutral genetic variation at a single locus. But, as is well known, additional insights can be gained by investigating multiple loci. The resulting patterns reflect the degree of association (linkage) between...

Journal: :Genetics 2002
Rongling Wu Chang-Xing Ma George Casella

Linkage analysis and allelic association (also referred to as linkage disequilibrium) studies are two major approaches for mapping genes that control simple or complex traits in plants, animals, and humans. But these two approaches have limited utility when used alone, because they use only part of the information that is available for a mapping population. More recently, a new mapping strategy...

Journal: :Arthritis Research 2001
Robert R Graham Carl D Langefeld Patrick M Gaffney Ward A Ortmann Scott A Selby Emily C Baechler Katherine B Shark Theresa C Ockenden Kristine E Rohlf Kathleen L Moser William M Brown Sherine E Gabriel Ronald P Messner Richard A King Pavel Horak James T Elder Philip E Stuart Steven S Rich Timothy W Behrens

Systemic lupus erythematosus (SLE) is a chronic autoimmune disease characterized by the production of autoantibodies to a wide range of self-antigens. Recent genome screens have implicated numerous chromosomal regions as potential SLE susceptibility loci. Among these, the 1q41 locus is of particular interest, because evidence for linkage has been found in several independent SLE family collecti...

Journal: :Genetics 1979
C C Laurie-Ahlberg B S Weir

Nine laboratory populations of D. melanogaster were surveyed by starch gel electrophoresis for variation at 17 enzyme loci. A single-fly extract could be assayed for all 17 enzymes, so that the data consist of 17-locus genotypes.--Pairwise linkage disequilibria were estimated from the multilocus genotypic frequencies, using both Burrows' and Hill's methods. Large amounts of linkage disequilibri...

2013
Yi-Hong Wang Hari D. Upadhyaya A. Millie Burrell Sayed Mohammad Ebrahim Sahraeian Robert R. Klein Patricia E. Klein

To facilitate the mapping of genes in sorghum [Sorghum bicolor (L.) Moench] underlying economically important traits, we analyzed the genetic structure and linkage disequilibrium in a sorghum mini core collection of 242 landraces with 13,390 single-nucleotide polymorphims. The single-nucleotide polymorphisms were produced using a highly multiplexed genotyping-by-sequencing methodology. Genetic ...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 1992
V Souza T T Nguyen R R Hudson D Piñero R E Lenski

Many bacterial species exhibit strong linkage disequilibrium of their chromosomal genes, which apparently indicates restricted recombination between alleles at different loci. The extent to which restricted recombination reflects limited migration between geographically isolated populations versus infrequent mixis of genotypes within populations is more difficult to determine. We examined the g...

2010
Rod Ball

Description R package for design of experiments for association studies for detection of linkage disequilibrium. Uses an existing deterministic power calculation for detection of linkage disequilibrium between a bi-allelic QTL and a bi-allelic marker, together with the Spiegelhalter and Smith Bayes factor to generate designs with power to detect effects with a given Bayes factor.

Journal: :Genetics 2001
S W Schaeffer C S Walthour D M Toleno A T Olek E L Miller

A 3.5-kb segment of the alcohol dehydrogenase (Adh) region that includes the Adh and Adh-related genes was sequenced in 139 Drosophila pseudoobscura strains collected from 13 populations. The Adh gene encodes four protein alleles and rejects a neutral model of protein evolution with the McDonald-Kreitman test, although the number of segregating synonymous sites is too high to conclude that adap...

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