30% of the DNA in E. coli bacteria is covered by proteins. Such high degree of crowding affect the dynamics of generic biological processes (e.g. gene regulation, DNA repair, protein diffusion etc.) in ways that are not yet fully understood. In this paper, we theoretically address the diffusion constant of a tracer particle in a one dimensional system surrounded by impenetrable crowder particle...

We consider an elliptic and time-inhomogeneous diffusion process with timeperiodic coefficients evolving in a bounded domain of R with a smooth boundary. The process is killed when it hits the boundary of the domain (hard killing) or after an exponential time (soft killing) associated with some bounded rate function. The branching particle interpretation of the non absorbed diffusion again beha...

Single particle tracking is a powerful technique often used in the study of dynamic mechanisms on the cell surface such as binding, confinement and trafficking. Experimental trajectories can be used to detect changes in the lateral mobility of individual molecules over time and space. Therefore, a potential problem in the analysis of single particle trajectories is to account for transitions be...

The hydrodynamic interactions between colloidal particles in small ensembles are measured at varying distances from a no-slip surface over a range of inter-particle separations. The diffusion tensor for motion parallel to the wall of each ensemble is calculated by analyzing thousands of particle trajectories generated by blinking holographic optical tweezers and by dynamic simulation. The Stoke...

The diffusion of molecules through uniform homogeneous materials can readily be described by Brownian motion or generalizations thereof. The further generalization of these models to describe molecular diffusion through heterogeneous and nonstationary solvents is much less understood. Phenomenological nonstationary generalizations of the generalized Langevin equation (GLE) have earlier been dev...

We study the interface dynamics of a binary particle mixture in a rotating cylinder numerically. By considering only the particle motion in axial direction, it is shown that the initial dynamics can be well described by a one-dimensional diffusion process. This allows us to calculate a macroscopic diffusion constant and we study its dependence on the inter-particle friction coefficient, the rot...

The nanoparticle transportation and Brownian diffusion in planar jet flow is simulated via large eddy simulation in this work. To thorough compare the Brownian diffusion with different particle size, we computed three particle diameter dp = 1 nm, 10 nm and 50 nm in one simulation process simultaneously. The numerical results showed that at the flow developing stage, the particle mass concentrat...

A cathodic voltammetric wave was observed in an aqueous suspension of mono-dispersed, spherical polyaniline-coated polystyrene particles, whereas no anodic wave was detected. This irreversibility was common to particles with eight different diameters ranging from 0.2 to 7.5 μm. Such irreversibility cannot be found at polyaniline-coated electrodes, and thus is a property of the dispersion of pol...

This paper presents a model calculation of solar energetic particle propagation in a three-dimensional interplanetary magnetic field. The model includes essentially all the particle transport mechanisms: streaming along magnetic field lines, convection with the solar wind, pitch-angle diffusion, focusing by the inhomogeneous interplanetary magnetic field, perpendicular diffusion, and pitch-angl...

The thickness of the bedload layer is a crucial parameter for evaluating sediment transport rates in open channel flow, but it is often determined empirically. Based on the concept of the hydrodynamic diffusion related to particle-particle interactions, an analytical model is proposed in this study for computing the thickness of the bedload layer. The coefficient of diffusion is assumed to be a...