نتایج جستجو برای: solvation

تعداد نتایج: 5929  

Journal: :Physical review. E, Statistical, nonlinear, and soft matter physics 2006
Akira Onuki

We present a Ginzburg-Landau theory of solvation of ions in polar binary mixtures. The solvation free energy arising from the ion-dipole interaction can strongly depend on the composition and the ion species. Most crucial in phase separation is then the difference in the solvation free energy between the two phases, which is the origin of the Galvani potential difference known in electrochemist...

Journal: :The journal of physical chemistry. B 2009
Jonathan M Mullin Mark S Gordon

The solvation of alanine is investigated, with a focus on adding a sufficient number of discrete water molecules to determine the first solvation shell for both the nonionized (N) and zwitterionic (Z) forms to converge the enthalpy of solvation and the enthalpy difference for the two forms of alanine. Monte Carlo sampling was employed using the generalized effective fragment potential (EFP) met...

2004
Xin Yang Boggavarapu Kiran Xue-Bin Wang Lai-Sheng Wang Pavel Jungwirth

We report a photoelectron spectroscopy and computational study of hydrated N3 anion clusters, N3(H2O)n (n ) 0-16), in the gas phase. Photoelectron spectra of the solvated azide anions were observed to consist of a single peak, similar to that of the bare N3, but the spectral width was observed to broaden as a function of cluster size due to solvent relaxation upon electron detachment. The adiab...

Journal: :Journal of computational chemistry 2008
Urs Haberthür Amedeo Caflisch

An efficient method for calculating the free energy of solvation of a (macro)molecule embedded in a continuum solvent is presented. It is based on the fully analytical evaluation of the volume and spatial symmetry of the solvent that is displaced from around a solute atom by its neighboring atoms. The two measures of solvent displacement are combined in empirical equations to approximate the at...

2014
Libo Li Christopher J. Fennell Ken A. Dill

Previous work describes a computational solvation model called semi-explicit assembly (SEA). The SEA water model computes the free energies of solvation of nonpolar and polar solutes in water with good efficiency and accuracy. However, SEA gives systematic errors in the solvation free energies of ions and charged solutes. Here, we describe field-SEA, an improved treatment that gives accurate so...

Journal: :Journal of computational chemistry 2017
Duc D. Nguyen Guo-Wei Wei

This article explores the impact of surface area, volume, curvature, and Lennard-Jones (LJ) potential on solvation free energy predictions. Rigidity surfaces are utilized to generate robust analytical expressions for maximum, minimum, mean, and Gaussian curvatures of solvent-solute interfaces, and define a generalized Poisson-Boltzmann (GPB) equation with a smooth dielectric profile. Extensive ...

Journal: :Physical chemistry chemical physics : PCCP 2014
Prabhat Kumar Sahu Sudhir Kumar Das Moloy Sarkar

The solvation and rotational relaxation dynamics of coumarin 153 have been investigated in a dicationic ionic liquid (IL), 1,6-bis-(3-methylimidazolium-1-yl)hexane bis-(trifluoromethylsulfonyl)amide ([C6(MIm)2][NTf2]2), for the first time to provide a comprehensive and a quantitative understanding of the nature of the ionic fluid and its influence on the average solvation and rotational relaxat...

Journal: :The journal of physical chemistry. B 2007
Paul Abbyad Xinghua Shi William Childs Tim B McAnaney Bruce E Cohen Steven G Boxer

Proteins respond to electrostatic perturbations through complex reorganizations of their charged and polar groups, as well as those of the surrounding media. These solvation responses occur both in the protein interior and on its surface, though the exact mechanisms of solvation are not well understood, in part because of limited data on the solvation responses for any given protein. Here, we c...

Journal: :Journal of chemical theory and computation 2010
Junjun Liu Casey P Kelly Alan C Goren Aleksandr V Marenich Christopher J Cramer Donald G Truhlar Chang-Guo Zhan

Building on the SVPE (surface and volume polarization for electrostatics) model for electrostatic contributions to the free energy of solvation with explicit consideration of both surface and volume polarization effects, on the SMx approach to including first-solvation-shell contributions, and on the linear relationship between the electric field and short-range electrostatic contributions foun...

Journal: :Physical chemistry chemical physics : PCCP 2011
Mohsen Sajadi Michael Weinberger Hans-Achim Wagenknecht Nikolaus P Ernsting

Time-dependent Stokes shifts (TDSS) were measured for diverse polarity probes in water, heavy water, methanol, and benzonitrile, by broadband fluorescence up-conversion with 85 fs time resolution. In water the spectral dynamics is solute-independent and quantitatively described by simple dielectric continuum theory of solvation. In methanol the slower part of the TDSS is solute-dependent. A cor...

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