نتایج جستجو برای: viral genotypes

تعداد نتایج: 204021  

Journal: :Enfermedades infecciosas y microbiologia clinica 2008
Francisco Rodríguez-Frias Rosendo Jardi

The hepatitis B virus (HBV) belongs to the hepadnavirus family. The genome of the virus, formed by a small DNA molecule with 3,200 base pairs, has 4 strongly overlapping protein coding regions: ORF preS/S, corresponding to the envelope proteins that constitute the HBV surface antigen (HBsAg); ORF preC/C, which encodes the viral capsid component (core antigen or HBcAg) and a non-structural prote...

Journal: :AIDS 2008
Federico G Hoffmann Xiang He John T West Philippe Lemey Chipepo Kankasa Charles Wood

OBJECTIVE To characterize the envelope (Env) glycoprotein of HIV-1 in mother-infant pairs (MIP) that underwent near simultaneous or acute-phase seroconversion, we examined the Env sequence of the transmitted viruses and compare viral evolution within the pair. DESIGN Three MIP from a Zambian cohort that seroconverted at the same sampling time were identified and followed longitudinally. MET...

Journal: :Journal of virology 2016
Andreas Walker Kathrin Skibbe Eike Steinmann Stephanie Pfaender Thomas Kuntzen Dominik A Megger Svenja Groten Barbara Sitek Georg M Lauer Arthur Y Kim Thomas Pietschmann Todd M Allen Joerg Timm

UNLABELLED Antiviral CD8(+) T cells are a key component of the adaptive immune response against HCV, but their impact on viral control is influenced by preexisting viral variants in important target epitopes and the development of viral escape mutations. Immunodominant epitopes highly conserved across genotypes therefore are attractive for T cell based prophylactic vaccines. Here, we characteri...

2014
Valentina Panzarin Elisabetta Cappellozza Marzia Mancin Adelaide Milani Anna Toffan Calogero Terregino Giovanni Cattoli

Betanodaviruses are the causative agents of viral nervous necrosis and affect a broad range of fish species worldwide. Their bi-segmented genome is composed of the RNA1 and the RNA2 molecules encoding the viral polymerase and the coat protein, respectively. In southern Europe the presence of the RGNNV and the SJNNV genotypes, and the RGNNV/SJNNV and RGNNV/SJNNV reassortants has been documented....

2015
Angela M. Mitchell Amy E. L. Stone Linling Cheng Kimberly Ballinger Michael G. Edwards Mark Stoddard Hui Li Lucy Golden-Mason George M. Shaw Salman Khetani Hugo R. Rosen

UNLABELLED Hepatitis C virus (HCV) infection leads to persistence in the majority of cases despite triggering complex innate immune responses within the liver. Although hepatocytes are the preferred site for HCV replication, nonparenchymal cells (NPCs) can also contribute to antiviral immunity. Recent innovations involving single-genome amplification (SGA), direct amplicon sequencing, and phylo...

Journal: :Memorias do Instituto Oswaldo Cruz 2008
Meri Bordignon Nogueira Vanessa Stella Juliano Bordignon Weber Cheli Batista Luana de Borba Luis Hildebrando Pereira da Silva Federico Guillermo Hoffmann Christian Macagnan Probst Claudia Nunes Duarte dos Santos

The reintroduction of dengue virus type 3 (DENV-3) in Brazil in 2000 and its subsequent spread throughout the country was associated with genotype III viruses, the only DENV-3 genotype isolated in Brazil prior to 2002. We report here the co-circulation of two different DENV-3 genotypes in patients living in the Northern region of Brazil during the 2002-2004 epidemics. Complete genomic sequences...

ژورنال: Medical Laboratory Journal 2016
Beiranvand, Behrouz, Garmsiri , Mahshid, Nazer, Mohamad Reza , Obeidavi, Zia,

ABSTRACT        Background and Objective: This study was conducted to evaluate epidemiology of risk factors for hepatitis C virus (HCV) transmission, and determine the association of its genotypes with viral load and response to treatment in patients referred to the Infectious Disease Clinic of Khorramabad.         Methods...

2002
Paul A. Rota Stephanie L. Liffick Jennifer S. Rota Russell S. Katz Susan Redd Mark Papania William J. Bellini

From 1997 to 2001, sequence data from 55 clinical specimens were obtained from confirmed measles cases in the United States, representing 21 outbreaks and 34 sporadic cases. Sequence analysis indicated the presence of 11 of the recognized genotypes. The most common genotypes detected were genotype D6, usually identified from imported cases from Europe, and genotype D5, associated with importati...

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