نتایج جستجو برای: array cgh

تعداد نتایج: 134291  

Journal: :Journal of the American Statistical Association 2008

2014
Jung Hye Byeon Eunsim Shin Gun-Ha Kim Kyungok Lee Young Sook Hong Joo Won Lee Baik-Lin Eun

PURPOSE Array comparative genomic hybridization (array-CGH) is a technique used to analyze quantitative increase or decrease of chromosomes by competitive DNA hybridization of patients and controls. This study aimed to evaluate the benefits and yield of array-CGH in comparison with conventional karyotyping in pediatric neurology patients. MATERIALS AND METHODS We included 87 patients from the...

Journal: :Bioinformatics 2009
Mark A. van de Wiel Rebecca Brosens Paul H. C. Eilers Candy Kumps Gerrit Meijer Björn Menten Erik Sistermans Frank Speleman Marieke E. Timmerman Bauke Ylstra

MOTIVATION Many high-resolution array comparative genomic hybridization tumor profiles contain a wave bias, which makes accurate detection of breakpoints in such profiles more difficult. RESULTS An efficient and highly effective algorithm that largely removes the wave bias from tumor profiles by regressing the tumor profile data on data of profiles from the clinical genetics practice. Results...

Journal: :Bioinformatics 2005
Paul H. C. Eilers Renée X. de Menezes

MOTIVATION Plots of array Comparative Genomic Hybridization (CGH) data often show special patterns: stretches of constant level (copy number) with sharp jumps between them. There can also be much noise. Classic smoothing algorithms do not work well, because they introduce too much rounding. To remedy this, we introduce a fast and effective smoothing algorithm based on penalized quantile regress...

2010
Charalampos E. Tsourakakis David Tolliver Maria A. Tsiarli Stanley Shackney Russell Schwartz

The development of cancer is largely driven by the gain or loss of subsets of the genome, promoting uncontrolled growth or disabling defenses against it. Identifying genomic regions whose DNA copy number deviates from the normal is therefore central to understanding cancer evolution. Array-based comparative genomic hybridization (aCGH) is a high-throughput technique for identifying DNA gain or ...

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