Phylogenetic analysis of influenza subtype H5N1 viruses isolated from Vietnam during 2005-2007 shows that multiple sublineages are present in Vietnam. Clade 2.3.4 viruses have replaced clade 1 viruses in northern Vietnam, and clade 1 viruses have been detected in southern Vietnam. Reassortment between these 2 sublineages has also occurred.

A new species of the Andean-Patagonian Liolaemus elongatus clade is described. Liolaemus crandalli sp. nov. differs from other members of its clade by a combination of coloration characters, scale counts and genetic traits. Liolaemus crandalli sp. nov. is known only from an isolated volcanic mountain in northwestern Patagonia above 1500 m.a.s.l. unconnected with other habitat suitable for speci...

Here we document introns in two Symbiodinium clades that were most likely gained following divergence of this genus from other peridinin-containing dinoflagellate lineages. Soluble peridinin-chlorophyll a-proteins (sPCP) occur in short and long forms in different species. Duplication and fusion of short sPCP genes produced long sPCP genes. All short and long sPCP genes characterized to date, in...

BACKGROUND AND AIMS The Spathelia-Ptaeroxylon clade is a group of morphologically diverse plants that have been classified together as a result of molecular phylogenetic studies. The clade is currently included in Rutaceae and recognized at a subfamilial level (Spathelioideae) despite the fact that most of its genera have traditionally been associated with other families and that there are no o...

Human immunodeficiency virus type 1 isolates of envelope genotype E are contributing substantially to the global pandemic. These strains appear to be mosaics, with the gag gene from clade A and the envelope from clade E; the parental clade E strain has not been found. Here we report the first full genomic sequence of one such mosaic virus, isolate CM240 from Thailand. Multiple breakpoints betwe...

After reports of unusually high mortality rates among ducks on farms in Java Island, Indonesia, in September 2012, influenza A(H5N1) viruses were detected and characterized. Sequence analyses revealed all genes clustered with contemporary clade 2.3.2.1 viruses, rather than enzootic clade 2.1.3 viruses, indicating the introduction of an exotic H5N1 clade into Indonesia.

Despite some continuing controversies, sauropod phylogeny is now the subject of broad agreement. Against this backdrop of relatively stable phylogenetic hypotheses, however, the nomenclature of the sauropod clade that includes Diplodocus and its relatives remains confused. Not all of the named groups within this clade have suitable phylogenetic defi nitions; others have multiple names; and some...