نتایج جستجو برای: phylogenetic typing groups

تعداد نتایج: 804048  

2014
Byron E. Batteiger Raymond Wan James A. Williams Linda He Arissa Ma J. Dennis Fortenberry Deborah Dean

Chlamydia trachomatis causes a high number of sexually transmitted infections worldwide, but reproducible and precise strain typing to link partners is lacking. We evaluated multilocus sequence typing (MLST) for this purpose by detecting sequence types (STs) concordant for the ompA genotype, a single-locus typing standard. We tested samples collected during April 2000-October 2003 from members ...

2005
Laurence Armand-Lefevre Raymond Ruimy Antoine Andremont

Pig farming is a risk factor for increased nasal Staphylococcus aureus colonization. Using sequence typing and phylogenetic comparisons, we showed that overcolonization of farmers was caused by a few bacterial strains that were not present in nonfarmers but often caused swine infections. This finding suggests a high rate of strain exchange between pigs and farmers.

Journal: :Journal of clinical microbiology 2015
Gema Carrasco Sylvia Valdezate Noelia Garrido María J Medina-Pascual Pilar Villalón Juan A Sáez-Nieto

gyrB is used to improve the identification of the Nocardia species N. brasiliensis, N. higoensis, N. ignorata, N. otitidiscaviarum, N. paucivorans, N. pneumoniae, N. puris, N. takedensis, N. veterana, and N. vinacea, but it does not improve the identification of another 12 Nocardia studied species. gyrB provides typing and phylogenetic markers for N. carnea, N. transvalensis, N. brasiliensis, a...

2017
Hongseok Yoo Se Hun Gu Jaehun Jung Dong Hyun Song Changgyo Yoon Duck Jin Hong Eun Young Lee Woong Seog Il-Ung Hwang Daesang Lee Seong Tae Jeong Kyungmin Huh

An outbreak of febrile respiratory illness associated with human adenovirus (HAdV) occurred in the South Korea military during the 2014-15 influenza season and thereafter. Molecular typing and phylogenetic analysis of patient samples identified HAdV type 55 as the causative agent. Emergence of this novel HAdV necessitates continued surveillance in military and civilian populations.

2015
Xiao-Ping Liao Jing Xia Lei Yang Liang Li Jian Sun Ya-Hong Liu Hong-Xia Jiang

Bacterial resistance to the third-generation cephalosporin antibiotics has become a major concern for public health. This study was aimed to determine the characteristics and distribution of bla CTX-M-14, which encodes an extended-spectrum β-lactamase, in Escherichia coli isolated from Guangdong Province, China. A total of 979 E. coli isolates isolated from healthy or diseased food-producing an...

Journal: :Neuroscience 2021

Transcranial direct current stimulation (tDCS) is a non-invasive brain technique that may improve motor learning. However, the long-term effects of tDCS have not been explored, and ecological validity evaluated tasks was limited. To determine whether 20 sessions over primary cortex (M1) would enhance performance complex life skill, i.e., typing, in healthy young adults. Healthy adults (n = 60) ...

2013
Rebuma Firdessa Stefan Berg Elena Hailu Esther Schelling Balako Gumi Girume Erenso Endalamaw Gadisa Teklu Kiros Meseret Habtamu Jemal Hussein Jakob Zinsstag Brian D. Robertson Gobena Ameni Amanda J. Lohan Brendan Loftus Iñaki Comas Sebastien Gagneux Rea Tschopp Lawrence Yamuah Glyn Hewinson Stephen V. Gordon Douglas B. Young Abraham Aseffa

Molecular typing of 964 specimens from patients in Ethiopia with lymph node or pulmonary tuberculosis showed a similar distribution of Mycobacterium tuberculosis strains between the 2 disease manifestations and a minimal role for M. bovis. We report a novel phylogenetic lineage of M. tuberculosis strongly associated with the Horn of Africa.

Journal: :Journal of clinical microbiology 2000
G F Sanson M R Briones

We tested whether comparative sequence analysis of the mitochondrion-encoded cytochrome c oxidase subunit 2 gene (COX2) could be used to distinguish intraspecific variants of Candida glabrata. Mitochondrial genes are suitable for investigation of close phylogenetic relationships because they evolve much faster than nuclear genes, which in general exhibit very limited intraspecific variation. Fo...

Journal: :veterinary research forum 0
hesam alizade infectious and tropical disease research center, hormozgan health institute, hormozgan university of medical sciences, bandar abbas, iran reza ghanbarpour department of pathobiology, faculty of veterinary medicine, shahid bahonar university, kerman, iran maziar jajarami department of pathobiology, faculty of veterinary medicine, shahid bahonar university, kerman, iran asma askari department of pathobiology, faculty of veterinary medicine, shahid bahonar university, kerman, iran

colibacillosis caused by avian pathogenic escherichia coli (apec) is an economic threat to the poultry industry throughout the world. some of the virulence genes may enhance the ability of e. coli isolates to grow in the tissues of broilers. the apec strains are assigned to a few distinct phylogenetic groups. the purpose of the present study was to detect the virulence genes and phylogenetic gr...

2010
Iruka N. Okeke Faith Wallace-Gadsden Hannah R. Simons Nicholas Matthews Amy S. Labar Jennifer Hwang John Wain

BACKGROUND Enteroaggregative Escherichia coli (EAEC) are defined by their stacked-brick adherence pattern to human epithelial cells. There is no all-encompassing genetic marker for EAEC. The category is commonly implicated in diarrhea but research is hampered by perplexing heterogeneity. METHODOLOGY/PRINCIPAL FINDINGS To identify key EAEC lineages, we applied multilocus sequence typing to 126...

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