A statistical method of predicting hexanucleotide frequencies is presented. The method requires dinucleotide frequencies which can be readily obtained by nearest neighbor analysis. The frequencies of 64 hexanucleotides of E. coli were estimated and compared well with those predicted by a third order Markov chain.

Water oxidation is a key chemical reaction, central to both biological photosynthesis and artificial solar fuel synthesis strategies. Despite recent progress on the structure of the natural catalytic site, and on inorganic catalyst function, determining the mechanistic details of this multiredox reaction remains a significant challenge. We report herein a rate law analysis of the order of water...

Random scale-free networks have the peculiar property of being prone to the spreading of infections. Here we provide for the susceptible-infected-susceptible model an exact result showing that a scale-free degree distribution with diverging second moment is a sufficient condition to have null epidemic threshold in unstructured networks with either assortative or disassortative mixing. Degree co...

We present a new method to determine the curvature dependence of the interface tension between coexisting phases in a finite volume from free energies obtained by Monte Carlo simulations. For the example of a lattice gas on a 3D fcc lattice with nearest neighbor three-body interactions, we demonstrate how to calculate the equimolar radius R(e) as well as the radius R(s) of the surface of tensio...

In this paper we introduce a new method to describe dynamical patterns of the real exchange rate movements time series and to analyze contagion in currency crisis. The method combines the tools of Symbolic Time Series Analysis [18] with the nearest neighbor single linkage clustering algorithm [34]. Data symbolization allows to obtain a metric distance between two different time series that is u...

Remote sensing techniques have been shown effective for large-scale damagesurveys after a hazardous event in both near real-time or post-event analyses. The paperaims to compare accuracy of common imaging processing techniques to detect tornadodamage tracks from Landsat TM data. We employed the direct change detection approachusing two sets of images acquired before and after the tornado event ...

We study the time evolution of a single spin coupled by exchange interaction to an environment of interacting spin bath modeled by the XY Hamiltonian. By evaluating the spin correlator of the single spin, we observed that the decay rate of the spin oscillations strongly depends on the relative magnitude of the exchange coupling between the single spin and its nearest neighbor J(') and coupling ...

We describe our submitted algorithm to the text alignment sub-task of the plagiarism detection task in the PAN2014 challenge that achieved a plagdet score 0.855. By extracting contextual features for each document character and grouping those that are relevant for a given pair of documents, we generate seeds of atomic plagiarism cases. These are then merged by an agglomerative singlelinkage str...

Mossel and Vigoda (Reports, 30 September 2005, p. 2207) show that nearest neighbor interchange transitions, commonly used in phylogenetic Markov chain Monte Carlo (MCMC) algorithms, perform poorly on mixtures of dissimilar trees. However, the conditions leading to their results are artificial. Standard MCMC convergence diagnostics would detect the problem in real data, and correction of the mod...

(Received) Exact diagonalizations of two dimensional small t–J clusters reveal dominant hole-hole correlations at distance √ 2 (ie between holes on next nearest neighbor sites). A new form of singlet d x 2 −y 2 pair operator is proposed to account for the spatial extention of the two hole-bound pair beyond nearest neighbor sites.