نتایج جستجو برای: solvation number

تعداد نتایج: 1173669  

2002
Anatoli Milischuk Dmitry V. Matyushov

We report Monte Carlo simulations of solvation of a point dipole in dipolar–quadrupolar solvents of varying dipole moment and axial quadrupole. The simulations are carried out to test the prediction of dielectric solvation models of a monotonic increase of the absolute value of the solvation chemical potential umpu with the solvent dielectric constant e . Dielectric constants are obtained from ...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 1989
S A Simon T J McIntosh

As polar surfaces in solvent are brought together, they experience a large repulsive interaction, termed the solvation pressure. The solvation pressure between rough surfaces, such as lipid bilayers, has been shown previously to decay exponentially with distance between surfaces. In this paper, we compare measured values of the solvation pressure between bilayers and the dipole potential for mo...

Journal: :The journal of physical chemistry. B 2015
Mitchell T Ong Osvalds Verners Erik W Draeger Adri C T van Duin Vincenzo Lordi John E Pask

Lithium-ion battery performance is strongly influenced by the ionic conductivity of the electrolyte, which depends on the speed at which Li ions migrate across the cell and relates to their solvation structure. The choice of solvent can greatly impact both the solvation and diffusivity of Li ions. In this work, we used first-principles molecular dynamics to examine the solvation and diffusion o...

2010
Andriy Kovalenko

Statistical-mechanical, molecular theory of solvation (a.k.a. 3D-RISM-KH) predicts from the first principles the solvation structure and thermodynamics of nanosystems and properly accounts for chemical functionalities by representing both electrostatic and non-polar features of solvation structure such as hydrogen bonding and solvophobicity, salt bridges, structural solvent, associative and ele...

Journal: :Journal of chemical theory and computation 2016
Hyung-Kyu Lim Hankyul Lee Hyungjun Kim

Among various models that incorporate solvation effects into first-principles-based electronic structure theory such as density functional theory (DFT), the average solvent electrostatic potential/molecular dynamics (ASEP/MD) method is particularly advantageous. This method explicitly includes the nature of complicated solvent structures that is absent in implicit solvation methods. Because the...

Journal: :Journal of Computational Chemistry 1999
Marco Scarsi Amedeo Caflisch

A validation based on solvation energies (vacuum to water transfer) is not sufficient to justify the use of approximated models of electrostatics to rank ligand/protein complexes. A full validation should be based on energies in solution, i.e., solvation plus vacuum Coulomb energies, because of the anticorrelation between solvation and vacuum energies. The energy in solution is the relevant qua...

Journal: :journal of physical & theoretical chemistry 2011
s. mansouri

the molecular dynamics (md) simulation method is used to assess structural details for humanprion protein (hereafter prpn) and its asp178 asn mutant (hereafter prpm) which causes fatalfamilial insomnia disease. the results reveal that the flexibility and instability increase in prpmcould be related to specific amino acids exposed to the solvent. solvation free energy of prpm is 20kjmot1nni2 mor...

Journal: :Journal of chemical theory and computation 2018
Xiu Yang Huan Lei Peiyuan Gao Dennis G Thomas David L Mobley Nathan A Baker

Atomic radii and charges are two major parameters used in implicit solvent electrostatics and energy calculations. The optimization problem for charges and radii is underdetermined, leading to uncertainty in the values of these parameters and in the results of solvation energy calculations using these parameters. This paper presents a new method for quantifying this uncertainty in implicit solv...

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