نتایج جستجو برای: sulfolobus solfataricus

تعداد نتایج: 1402  

2013
Ningning Song Trong Nguyen Duc Liesbeth van Oeffelen Serge Muyldermans Eveline Peeters Daniel Charlier

Previously, Lrp-like transcriptional regulator LysM from the hyperthermoacidophilic crenarchaeon Sulfolobus solfataricus was proposed to have a single target, the lysWXJK operon of lysine biosynthesis, and a single effector molecule, l-lysine. Here we identify ∼70 novel binding sites for LysM in the S. solfataricus genome with a LysM-specific nanobody-based chromatin immunoprecipitation assay c...

Journal: :Molecular cell 2006
John M Pascal Oleg V Tsodikov Greg L Hura Wei Song Elizabeth A Cotner Scott Classen Alan E Tomkinson John A Tainer Tom Ellenberger

DNA sliding clamps encircle DNA and provide binding sites for many DNA-processing enzymes. However, it is largely unknown how sliding clamps like proliferating cell nuclear antigen (PCNA) coordinate multistep DNA transactions. We have determined structures of Sulfolobus solfataricus DNA ligase and heterotrimeric PCNA separately by X-ray diffraction and in complex by small-angle X-ray scattering...

2014
Marta Gogliettino Alessia Riccio Ennio Cocca Mosè Rossi Gianna Palmieri Marco Balestrieri

In this study, we gain insight into the extracellular proteolytic system of Sulfolobus solfataricus grown on proteinaceous substrates, providing further evidence that acidic proteases were specifically produced in response to peptide-rich media. The main proteolytic component was the previously isolated SsMTP (Sulfolobus solfataricus multi-domain thermopsin-like protease), while the less abunda...

Journal: :Nucleic acids research 1993
D Prangishvili H P Klenk

Recently, the nucleotide sequence of a DNA polymerase gene from Sulfolobus solfataricus was reported (1). The enzyme is a 100 kDa polypeptide also possessing a 3'—5' exonuclease activity. In addition to this enzyme in cells of Sulfolobus we have detected the presence of a smaller DNA polymerase devoid of any associated nuclease activities (2). We made an attempt to clone and sequence a gene for...

Journal: :Microbial Cell Factories 2007
Anna M Salzano Ferdinando Febbraio Tiziana Farias Giovanni P Cetrangolo Roberto Nucci Andrea Scaloni Giuseppe Manco

BACKGROUND Exposure to nickel (Ni) and its chemical derivatives has been associated with severe health effects in human. On the contrary, poor knowledge has been acquired on target physiological processes or molecular mechanisms of this metal in model organisms, including Bacteria and Archaea. In this study, we describe an analysis focused at identifying proteins involved in the recovery of the...

2014
Ziga Zebec Andrea Manica Jing Zhang Malcolm F. White Christa Schleper

The recently discovered clustered regularly interspaced short palindromic repeat (CRISPR)-mediated virus defense represents an adaptive immune system in many bacteria and archaea. Small CRISPR RNAs cause cleavage of complementary invading nucleic acids in conjunction with an associated protein or a protein complex. Here, we show CRISPR-mediated cleavage of mRNA from an invading virus in the hyp...

2016
Ziga Zebec Isabelle Anna Zink Melina Kerou Christa Schleper

CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats)-mediated RNA degradation is catalyzed by a type III system in the hyperthermophilic archaeon Sulfolobus solfataricus Earlier work demonstrated that the system can be engineered to target specifically mRNA of an endogenous host reporter gene, namely the β-galactosidase in S. solfataricus Here, we investigated the effect of single...

2015
Guannan Liu Roger A. Garrett Ling Deng Kristine Uldahl Soley Gudbergsdottir Erica Ferrandi Wenyuan Han Wenfang Peng Fei He Yang Guo Marzieh Mousaei Chandra Shekar Kenchappa Daniel Stiefler-Jensen Mariah Nabi Hien Phan Mariana Awayez Michael Christiaan Greeff Eleazar Rodriguez Magnus Wohlfahrt Rasmussen Signe Lolle Milena Roux Stephan Thorgrimsen Raquel Azevedo Sabrina Stanimirovic

Membrane vesicles released by cells are responsible for various cellular functions of Archaea. They can be, for example, a stress response and transport of toxic compound from cells. Although studies have shown that membrane vesicles produced by euryarchaeal Thermococcales could participate in DNA transfer between cells at high temperature (Gaudin et al., 2013), the biochemical compositions and...

Journal: :Journal of bacteriology 2002
Brian H Lower Peter J Kennelly

Treatment of a sodium dodecyl sulfate-polyacrylamide gel with periodic acid-Schiff (PAS) stain or blotting with Galanthus nivalis agglutinin revealed the presence of several glycosylated polypeptides in a partially purified detergent extract of the membrane fraction of Sulfolobus solfataricus. One of the glycoproteins comigrated with the membrane-associated protein-serine/threonine kinase from ...

2015
William K. Ray Mark B. Potters January D. Haile Peter J. Kennelly

The eukaryotic protein kinase (ePK) paradigm provides integral components for signal transduction cascades throughout nature. However, while so-called typical ePKs permeate the Eucarya and Bacteria, atypical ePKs dominate the kinomes of the Archaea. Intriguingly, the catalytic domains of the handful of deduced typical ePKs from the archaeon Sulfolobus solfataricus P2 exhibit significant resembl...

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