An electronic structure-based polarization method, called the X-POL potential, has been described for the purpose of constructing an empirical force field for modeling polypeptides. In the X-POL potential, the internal, bonded interactions are fully represented by an electronic structure theory augmented with some empirical torsional terms. Non-bonded interactions are modeled by an iterative, c...

Bacterial flagella assume different helical shapes during the tumbling phase of a bacterium but also in response to varying environmental conditions. Force-extension measurements by Darnton and Berg explicitly demonstrate a transformation from the coiled to the normal helical state (N.C. Darnton, H.C. Berg, Biophys. J. 92, 2230 (2007)). We here develop an elastic model for the flagellum based o...

Better understanding of the bimodal coupled bridge flutter involving fundamental vertical bending and torsional modes offers valuable insight into multimode coupled flutter, which has primarily been the major concern in the design of long span bridges. This paper presents a new framework that provides closed-form expressions for estimating modal characteristics of bimodal coupled bridge systems...

Compliant Actuators are desirable for human friendly robotics, especially for assistive and rehabilitation robots that have direct physical interaction with human users. Various designs of Series Elastic Actuators (SEA) have been developed for these applications. This paper presents a novel SEA design with variable impedance for human-friendly robotics applications that overcomes the major limi...

The mechanics of DNA supercoiling is a subject of crucial importance to uncover the mechanism and kinetics of several enzymes. It is therefore being investigated using several biochemical and biophysical methods including single molecule experimental techniques. An interesting problem within this realm is that of torsional buckling and plectoneme formation in DNA as it is simultaneously put und...

Recent analysis of the helioseismic observations indicate that the previously observed surface torsional oscillations extend significantly downwards into the solar convection zone. In an attempt to understand these oscillations, we study the nonlinear coupling between the magnetic field and the solar differential rotation in the context of a mean field dynamo model, in which the nonlinearity is...

We report on experimental demonstration of high frequency torsional resonators based on microdisk structures enabled by a “smart-cut” 6H-silicon carbide (6H-SiC) technology. Circular microdisks axially supported by pairs of thin tethers, with diameters of 5–15 lm, exhibit torsional-mode micromechanical resonances with frequency of 1–60 MHz, and quality (Q) factors up to 1280 at room temperature...

Numerical and experimental results for a rareŽ ed gas expansion through a thin circular oriŽ ce are presented. The oriŽ ce  owwas used as a calibrationtest for a torsional thrust standdesigned tomeasure force levels from10¡6 to 10¡3 N. Molecular nitrogen, argon, and helium at room temperature are used as test gases. The mass  ux and thrust measurements are compared with the direct simulationM...

Increasing evidence is becoming available about not only the surface differential rotation of rapidly rotating cool stars but, in a small number of cases, also about temporal variations, which possibly are analogous to the solar torsional oscillations. Given the present difficulties in resolving the precise nature of such variations, due to both the short length and poor resolution of the avail...

The parameters for the OPLS-AA potential energy function have been extended to include some functional groups that are present in macrocyclic polyketides. Existing OPLS-AA torsional parameters for alkanes, alcohols, ethers, hemiacetals, esters, and ketoamides were improved based on MP2/aug-cc-pVTZ and MP2/aug-cc-pVDZ calculations. Nonbonded parameters for the sp(3) carbon and oxygen atoms were ...