نتایج جستجو برای: vntr typing

تعداد نتایج: 23500  

2016
Samin Zamani Mehri Haeili Mohammad Javad Nasiri Abbas Ali Imani Fooladi Sedigheh Javadpour Mohammad Mehdi Feizabadi

Background. Considering that Hormozgan province in Iran (southern part of Iran on the Persian Gulf) is among the areas with high prevalence of MDR-MTB and attracts so many sailors and tourists, genetic diversity of MTB isolates circulating in this part of Iran was evaluated. Pattern of TB transmission was also examined. Methods and Material. A total of 38 isolates of MTB were cultured from TB p...

Journal: :Journal of clinical microbiology 2008
Caroline Allix-Béguec Dag Harmsen Thomas Weniger Philip Supply Stefan Niemann

Because of its portable data, discriminatory power, and recently proposed standardization, mycobacterial interspersed repetitive-unit-variable-number tandem-repeat (MIRU-VNTR) typing has become a major method for the epidemiological tracking of Mycobacterium tuberculosis complex (MTBC) clones. However, no public MIRU-VNTR database based on well-characterized reference strains has been available...

2013
Subok Lee Kyu-Jam Hwang Mi-Yeoun Park Seon-Do Hwang Hee-Youl Chai Hyuk Chu Sang-Hee Park

OBJECTIVES Brucellosis is the most common bacterial zoonosis in the world. Multilocus variable-number tandem-repeat (VNTR) analysis (MLVA) is a molecular method for genotyping bacterial species. Brucella abortus biovar I was isolated from most of the brucellosis-suspected patients in Korea. This study was conducted to investigate the ability of various MLVA primers that are used for molecular t...

2014
Urška Bidovec-Stojkovič Katja Seme Manca Žolnir-Dovč Philip Supply Igor Mokrousov

Shorter time-to-result is key for improving molecular-guided epidemiological investigation of tuberculosis (TB) cases. We performed a prospective study to evaluate the use of standardized MIRU-VNTR (mycobacterial interspersed repetitive-unit-variable-number tandem-repeat) typing of Mycobacterium tuberculosis directly on 79 fresh clinical samples from 26 TB patients consecutively enrolled over a...

Journal: :Journal of clinical microbiology 2007
Shiu-Yun Liang Haruo Watanabe Jun Terajima Chun-Chin Li Jui-Cheng Liao Sheng Kai Tung Chien-Shun Chiou

A multilocus variable-number tandem-repeat (VNTR) analysis (MLVA) method was developed and evaluated for the subtyping of Shigella sonnei isolates. A total of 26 VNTR loci were identified by exploring the repeat sequence loci in the genomic sequences of S. sonnei strains Ss046 and 53G and by testing 536 isolates that had previously been characterized by pulsed-field gel electrophoresis (PFGE). ...

2011
Kanglin Wan Jinghua Liu Yolande Hauck Yuanyuan Zhang Jie Liu Xiuqin Zhao Zhiguang Liu Bing Lu Haiyan Dong Yi Jiang Kristin Kremer Gilles Vergnaud Dick van Soolingen Christine Pourcel

BACKGROUND Investigation of the genetic diversity of Mycobacterium tuberculosis in China has shown that Beijing genotype strains play a dominant role in the tuberculosis (TB) epidemic. In order to examine the strain diversity in the whole country, and to study the evolutionary development of Beijing strains, we sought to genotype a large collection of isolates using different methods. METHODO...

Journal: :BMC Infectious Diseases 2008
Horng-Yunn Dou Fan-Chen Tseng Chih-Wei Lin Jia-Ru Chang Jun-Ren Sun Wen-Shing Tsai Shi-Yi Lee Ih-Jen Su Jang-Jih Lu

BACKGROUND The control of tuberculosis in densely populated cities is complicated by close human-to-human contacts and potential transmission of pathogens from multiple sources. We conducted a molecular epidemiologic analysis of 356 Mycobacterium tuberculosis (MTB) isolates from patients presenting pulmonary tuberculosis in metropolitan Taipei. Classical antibiogram studies and genetic characte...

Journal: :Preventive veterinary medicine 2014
T M Hlokwe P van Helden A L Michel

Tuberculosis caused by Mycobacterium bovis is recognized worldwide as a significant health risk in domestic cattle, farmed and wild animal species as well as in humans. We carried out spoligotyping and variable number of tandem repeat (VNTR) typing methods to characterize 490 M. bovis isolates from livestock (cattle, n=230; pig n=1) and wildlife species (n=259) originating from different farms ...

Journal: :Journal of clinical microbiology 2011
Sema Mandal Louise Bradshaw Laura F Anderson Tim Brown Jason T Evans Francis Drobniewski Grace Smith John G Magee Anne Barrett Oliver Blatchford Ian F Laurenson Amie-Louise Seagar Michael Ruddy P Lewis White Richard Myers Peter Hawkey Ibrahim Abubakar

Due to an increase in bovine tuberculosis in cattle in the United Kingdom, we investigated the characteristics of Mycobacterium bovis infection in humans and assessed whether extensive transmission of M. bovis between humans has occurred. A cross-sectional study linking demographic, clinical, and DNA fingerprinting (using 15-locus mycobacterial interspersed repetitive-unit-variable-number tande...

Journal: :The Onderstepoort journal of veterinary research 2011
Tiny M Hlokwe Akinbowale O Jenkins Elizabeth M Streicher Estelle H Venter Dave Cooper Jacques Godfroid Anita L Michel

Bovine tuberculosis (BTB), a chronic disease of mammals caused by Mycobacterium bovis, is a threat to South African wildlife. It has been reported that African buffaloes (Syncerus caffer) are reservoir hosts of BTB in South African wildlife populations. This study reports on the molecular identification and typing of 31 M. bovis isolates collected between 1993 and 2008, mainly from buffaloes b...

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