نتایج جستجو برای: genotype imputation

تعداد نتایج: 107592  

Journal: :Journal of dairy science 2015
A García-Ruiz F J Ruiz-Lopez G R Wiggans C P Van Tassell H H Montaldo

The effects of reference population size and the availability of information from genotyped ancestors on the accuracy of imputation of single nucleotide polymorphisms (SNP) were investigated for Mexican Holstein cattle. Three scenarios for reference population size were examined: (1) a local population of 2,011 genotyped Mexican Holsteins, (2) animals in scenario 1 plus 866 Holsteins in the US ...

2013
Peng Zhang Xiaowei Zhan Noah A. Rosenberg Sebastian Zöllner

The recent dramatic cost reduction of next-generation sequencing technology enables investigators to assess most variants in the human genome to identify risk variants for complex diseases. However, sequencing large samples remains very expensive. For a study sample with existing genotype data, such as array data from genome-wide association studies, a cost-effective approach is to sequence a s...

Journal: :Genetic epidemiology 2011
Lucy Huang Mattias Jakobsson Trevor J Pemberton Muntaser Ibrahim Thomas Nyambo Sabah Omar Jonathan K Pritchard Sarah A Tishkoff Noah A Rosenberg

Sub-Saharan Africa has been identified as the part of the world with the greatest human genetic diversity. This high level of diversity causes difficulties for genome-wide association (GWA) studies in African populations-for example, by reducing the accuracy of genotype imputation in African populations compared to non-African populations. Here, we investigate haplotype variation and imputation...

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