Welcome to the “BayesDiallel” R-package: software designed to provide parameter confidence measures for the many possible interpreative models of phenotypes generated by a diallel experiment1. This package provides a mostly-automated method for converting diallel phenotype measurements to Bayesian Gibbs-sampled model fits of the data, generating posterior-confidence measures and prediction plot...

December 21, 2010 Version 1.4.6 Date 2010-12-21 Author Peter Frommolt Maintainer Peter Frommolt Title Inferences for biand trifactorial trial designs Depends mvtnorm,multcomp,lattice,graphics,methods,Rcpp (>= 0.8.8) LinkingTo Rcpp Description This package makes global and multiple inferences for given biand trifactorial clinical trial designs using bootstrap method...

November 21, 2016 Type Package Title iASeq: integrating multiple sequencing datasets for detecting allele-specific events Version 1.18.0 Date 2012-02-13 Author Yingying Wei, Hongkai Ji Maintainer Yingying Wei Description It fits correlation motif model to multiple RNAseq or ChIPseq studies to improve detection of allele-specific events and describe correlation patterns across s...

August 29, 2013 Type Package Title Threshold Regression Version 1.0.2 Date 2012-11-26 Author Tao Xiao Maintainer Tao Xiao Depends survival, Formula Description Fit a threshold regression model based on the first-hitting-time of a boundary by the sample path of a Wiener diffusion process. The threshold regression methodology is well suited to applications involving survival ...

March 28, 2017 Title An R package for subset-based association analysis of heterogeneous traits and subtypes Version 1.12.0 Date 2015-06-01 Author Samsiddhi Bhattacharjee, Nilanjan Chatterjee and William Wheeler Description An R package for subset-based analysis of heterogeneous traits and subtypes. Maintainer William Wheeler Depends MASS, msm, rmeta, mvtnorm, tmvnsim Sugg...

April 19, 2009 Version 1.0.2 Date 2007-07-13 Maintainer Deli Wang Author Deli Wang, Jian Huang Depends splines Title A two-way semilinear model for normalization and analysis of cDNA microarray data. Description twslm is for normalization of cDNA microarray data with the two-way semilinear model. Huber’s and Tukey’s bisquare weight functions are available for robust esti...