November 21, 2016 Type Package Title signeR Version 1.0.0 Author Rafael Rosales, Rodrigo Drummond, Renan Valieris, Israel Tojal da Silva Maintainer Renan Valieris Description The signeR package provides an empirical Bayesian approach to mutational signature discovery. It is designed to analyze single nucleotide variaton (SNV) counts in cancer genomes, but ...

March 21, 2011 Version 1.21-2 Date 18 Mar 2011 Title Tools for analyzing QTL experiments Author Karl W Broman and Hao Wu, with ideas from Gary Churchill and Saunak Sen and contributions from Danny Arends, Ritsert Jansen, Pjotr Prins, and Brian Yandell Maintainer Karl W Broman Description Analysis of experimental crosses to identify genes (ca...

OBJECTIVE The purposes of this research were to (1) compare the shear-peel bond strength (SPBS) of a band of a fixed space maintainer (SM) cemented with five different adhesive cements; and (2) compare the survival time of bands of SM with each cement type after simulating mechanical fatigue stress. MATERIALS AND METHODS Seventy-five teeth were used to assess retentive strength and another 50...

March 29, 2017 Type Package Title Empirical Bayesian approach to mutational signature discovery Version 1.0.1 Author Rafael Rosales, Rodrigo Drummond, Renan Valieris, Israel Tojal da Silva Maintainer Renan Valieris Description The signeR package provides an empirical Bayesian approach to mutational signature discovery. It is designed to analyze single nucl...

December 21, 2016 Title Bayesian Robust Inference for Differential Gene Expression Version 1.38.0 Author Raphael Gottardo Description Test for differentially expressed genes with microarray data. This package can be used with both cDNA microarrays or Affymetrix chip. The packge fits a robust Bayesian hierarchical model for testing for differential expression. Outliers are modeled explicitly usi...

January 31, 2017 Title Bayesian Robust Inference for Differential Gene Expression Version 1.38.0 Author Raphael Gottardo Description Test for differentially expressed genes with microarray data. This package can be used with both cDNA microarrays or Affymetrix chip. The packge fits a robust Bayesian hierarchical model for testing for differential expression. Outliers are modeled explicitly usin...

Aim- Background-Trauma to the oral region occurs frequently and comprise 5% of all injuries. Among facial injuries, dental injuries are most common which avulsions occur in 1–16% cases. Avulsion is defined as total displacement tooth out its socket. An avulsed can usually be retained by replantation; however, prognosis depends on extraoralduration, condition tooth, patient’s age root develo...

the present study was carried out with the objective of validating linked ssr markers to rf genes and adopting marker assisted selection (mas) for restorer/non-restorer line detection in wild abortive (wa) type of cytoplasmic male sterility (cms). twelve ssr markers reported to be linked to rf genes were analyzed in the mapping population of nedaa/pajouhesh. among these, three markers, namely, ...

Though cytoplasmic male sterility (CMS) in peppers is associated with the orf507 gene, definitive and direct evidence that it directly causes male sterility is still lacking. In this study, differences in histochemical localization of anther cytochrome c oxidase between the pepper CMS line and maintainer line were observed mainly in the tapetal cells and tapetal membrane. Inducible and specific...

August 2, 2013 Version 1.33.1 Date 2011-02-09 Title A ‘‘corrective make-up’’ program for microarray chips Author Mayte Suarez-Farinas, Maurizio Pellegrino, Knut M. Wittkowski, Marcelo O. Magnasco Maintainer Maurizio Pellegrino Depends R (>= 2.10) Imports affy, altcdfenvs, Biobase, stats, utils Description The package is used to detect extended, diffuse and compact blemi...