نتایج جستجو برای: transcriptome assembly

تعداد نتایج: 158382  

2014
Antoine Molaro Ilaria Falciatori Emily Hodges Alexei A. Aravin Krista Marran Shahin Rafii W. Richard McCombie Andrew D. Smith Gregory J. Hannon

Material Supplemental http://genesdev.cshlp.org/content/suppl/2014/07/16/28.14.1544.DC1.html References http://genesdev.cshlp.org/content/28/14/1544.full.html#ref-list-1 This article cites 36 articles, 10 of which can be accessed free at: License Commons Creative . http://creativecommons.org/licenses/by-nc/4.0/ at Creative Commons License (Attribution-NonCommercial 4.0 International), as descri...

Journal: :E3S web of conferences 2021

There are many assemblers with different algorithms that used for de novo transcriptome assembly. At the same time, filtering stage, which is one of key stages, also has several approaches and algorithms. However, to date, there only few studies on effect degree filtration assembly, specially single-end reads. In this paper, we analyzed transcriptomes obtained using two most common software (rn...

Journal: :Genome research 2017
T S Keshava Prasad Ajeet Kumar Mohanty Manish Kumar Sreelakshmi K Sreenivasamurthy Gourav Dey Raja Sekhar Nirujogi Sneha M Pinto Anil K Madugundu Arun H Patil Jayshree Advani Srikanth S Manda Manoj Kumar Gupta Sutopa B Dwivedi Dhanashree S Kelkar Brantley Hall Xiaofang Jiang Ashley Peery Pavithra Rajagopalan Soujanya D Yelamanchi Hitendra S Solanki Remya Raja Gajanan J Sathe Sandip Chavan Renu Verma Krishna M Patel Ankit P Jain Nazia Syed Keshava K Datta Aafaque Ahmed Khan Manjunath Dammalli Savita Jayaram Aneesha Radhakrishnan Christopher J Mitchell Chan-Hyun Na Nirbhay Kumar Photini Sinnis Igor V Sharakhov Charles Wang Harsha Gowda Zhijian Tu Ashwani Kumar Akhilesh Pandey

Complementing genome sequence with deep transcriptome and proteome data could enable more accurate assembly and annotation of newly sequenced genomes. Here, we provide a proof-of-concept of an integrated approach for analysis of the genome and proteome of Anopheles stephensi, which is one of the most important vectors of the malaria parasite. To achieve broad coverage of genes, we carried out t...

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