SUMMARY In order to obtain an accurate description of the protein interior, we describe a simple and fast algorithm that measures the depth of each atom in a protein (dpx), defined as its distance (A) from the closest solvent accessible atom. The program reads a PDB file containing the atomic solvent accessibility in the B-factor field, and writes a file in the same format, where the B-factor f...

Sixty-five soybean varieties were tested in the field for resistance to Rotylenchulus reniformis. Criteria for resistance or susceptibility were root necrosis, nematode recovery from roots and soil, and egg production. Nine varieties were resistant, 13 moderately resistant, 26 moderately susceptible, and 17 susceptible. Linear correlations between resistance rating and each assessment parameter...

The goal of this study was to promptly map the extent of corn and soybeans early in the growing season. A classification experiment was conducted for the US Corn Belt and neighboring states, which is the most important production area of corn and soybeans in the world. To improve the timeliness of the classification algorithm, training was completely based on reference data and images from othe...

Both soybean composition and processing conditions impact the nutritional quality of soybean meal. The objective of this experiment was to compare nutrient compositions of soybeans grown under diverse environmental conditions in a variety of locations. Dry matter, organic matter, and ash concentrations differed in soybeans collected within the countries of Brazil, China, and the United States, ...

A CE-TOF MS proteomic approach was applied for the analysis of hydrolyzates from complex soybean protein mixtures. After CE-TOF MS method development, the new approach provided the simultaneous analysis of more than 150 peptides from the soybean protein fraction soluble in ACN-water (80/20 v/v). The method is fast (about 30 min of analysis per sample) and is characterized by a relatively low ru...

for small cheese-making factories, with no effluent treatment plants, whey can be a serious problem and the landfarming technique represents an alternative for its disposal. however, whey may contain antibiotic residues at the maximum residue limits. therefore, in this work, we evaluated the phytotoxic effect of different concentrations of five antibiotics (enrofloxacin, kanamycin, oxytetracycl...

Knowledge of production-system performance is largely based on observations at the experimental plot scale. Although yield gaps between plot-scale and field-scale research are widely acknowledged, their extent and persistence have not been experimentally examined in a systematic manner. At a site in southwest Michigan, we conducted a 6-y experiment to test the accuracy with which plot-scale cro...

Soil tillage systems can be able to influence soil compaction, water dynamics, soil temperature and crop yield. These processes can be expressed as changes of soil microbiological activity, soil respiration and sustainability of agriculture. Objectives of this study were: 1 to assess the effects of tillage systems (Conventional System (CS), Minimum Tillage (MT), No-Tillage (NT)) on soil compact...

Ozone is a powerful oxidizing agent which is responsible for more damage to vegetation than any other air pollutant. In this study, leaf growth, photosynthesis, and carbohydrate content were analysed during the seed-filling growth stage of field-grown soybeans exposed to ambient air and 1.2 times ambient ozone concentration using a Free Air Concentration Enrichment (FACE) facility. By contrast ...

Soybeans represent a recent and powerful threat to tropical biodiversity in Brazil. Developing effective strategies to contain and minimize the environmental impact of soybean cultivation requires understanding of both the forces that drive the soybean advance and the many ways that soybeans and their associated infrastructure catalyse destructive processes. The present paper presents an up-to-...