August 29, 2013 Type Package Title SSD for R to analyze single system data Version 1.3 Date 2013-03-28 Author Charles Auerbach,PHD Wendy Zeitlin Schudrich,PHD Wurzweiler School of Social Work Maintainer Charles Auerbach Depends R (>= 2.10.0), stats, graphics, utils, tcltk,psych Suggests MASS, TSA,TTR Description Package to visually and statistically analyze single system data ...

April 25, 2017 Type Package Title iASeq: integrating multiple sequencing datasets for detecting allele-specific events Version 1.20.0 Date 2012-02-13 Author Yingying Wei, Hongkai Ji Maintainer Yingying Wei Description It fits correlation motif model to multiple RNAseq or ChIPseq studies to improve detection of allele-specific events and describe correlation patterns across stud...

Transfer of Cytoplasmic Male Sterility into Rice Diversifying the existing cytoplasmic male sterility (CMS) sources of rice is indispensable for a sustainable production system of hybrid seed. Ahmadikhah et al. report that maintainer line Yosen B was converted to a CMS line (Yosen A) in three generations by markerassisted backcrossing. The recurrent parent genome content of the final CMS line w...

this study is aimed to evaluate the effect of covering exposed root surface by collagen membrane and to compare this method with coronoally advanced flap covering. 26 teeth in 20 patients (12m/8f) with miller1 gingival recession were selected. 14 teeth were allocated into test group and 12 teeth in control group. following first phase of treatment, clinical parameters including the height and w...

the cytoplasmic male sterile (cms) lines that are used in production of hybrid seeds in three-line system often get contaminated with their maintainer lines. using such impure cms lines in rice hybrid seed production lead to un-uniformity and yield loss in hybrid rice. laborious and time consuming phenotypic evaluations are used for elimination of off-type plants in cms multiplication farms. th...

November 6, 2009 Type Package Title Robust tests for case-control genetic association studies Version 1.01 Date 2009-11-06 Author Yong ZANG , Wingkam FUNG , Gang ZHENG Maintainer Yong ZANG Depends R (>= 2.6.0), mvtnorm Description This package supplies several robust tests for case-control genetic association studies. T...

December 23, 2009 Version 1.1-0 Date 2009-12-22 Depends R (>= 2.10.1), mvtnorm Title Modified Maximum Contrast Method Author Kengo NAGASHIMA and Yasunori SATO Maintainer Kengo NAGASHIMA Description This package provides an implementation of a modified maximum contrast method and the maximum contrast method. This version supports functions mmcm.mvt, mcm.mvt that gives P-va...

November 20, 2016 Version 1.46.0 Date 2011-02-09 Title A ``corrective make-up'' program for microarray chips Author Mayte Suarez-Farinas, Maurizio Pellegrino, Knut M. Wittkowski, Marcelo O. Magnasco Maintainer Maurizio Pellegrino Depends R (>= 2.10) Imports affy, altcdfenvs, Biobase, stats, utils Description The package is used to detect extended, diffuse and compact bl...

mzID is a parser for the mzIdentML file format defined by HUPO. The mzIdentML file format is designed to be a standardized way of reporting results from peptide identification analyses used in proteomics. The file format is XML compliant and the parser relies heavily on the XML package. mzID is designed to be applicable to all instances of mzIdentML files. As there is a multitude of different w...

Often the code regions that are assigned for a maintenance task do not follow the modularization of the original application program, but instead include parts of code from many different units scattered throughout the application. In this paper, we investigate an approach to testing which we call concern-based testing, which leverages existing tools to help software maintainers identify the re...