BACKGROUND Derangements of one-carbon metabolism have been related to the development of chronic diseases. Metabolic profiling as part of epidemiological studies in this area should include intermediates involved in the transfer of one-carbon units, cofactors for the relevant enzymes and markers of inflammation, kidney function and smoking. METHODS We established five platforms that measured ...

The Critical Assessment of Small Molecule Identification, or CASMI, contest was founded in 2012 to provide scientists with a common open dataset to evaluate their identification methods. In this article, the challenges and solutions for the inaugural CASMI 2012 are presented. The contest was split into four categories corresponding with tasks to determine molecular formula and molecular structu...

Three humic phenolic monomers, catechol (CAT), caffeic acid (CAFF), and p-coumaric acid (COUM), were subjected to oxidative coupling catalyzed by biomimetic water-soluble iron-porphyrin (Fe(TDCPPS)CI) in either separate or mixed solution, and the reaction products were characterized by gas chromatography-mass spectrometry (GC-MS) and electrospray-mass spectrometry (ESI-MS). The GC-MS analysis p...

The determination of atmospheric concentrations of levoglucosan and its two isomers, unambiguous tracers of biomass burning emissions, became even more important with the development of wood as renewable energy for domestic heating. Many researches demonstrated the increase during recent years of atmospheric particulate matter load due to domestic biomass combustion in developed countries. Anal...

The volatile compounds obtained from the different organs of Houttuynia cordata (Saururaceae) and Litsea cubeba (Lauraceae) were analyzed by Gas Chromatography/Mass Spectrometry (GC/MS), Headspace Solid Phase Micro Extraction-Gas Chromatography/Mass Spectrometry (HS-SPME-GC/MS), and GC/olfactometry (GC/O). The major component of all parts of H. cordata is assigned as 4-tridecanone. Each organ p...

Different solvent extracts of a red algae, Hypnea flagelliformis,and two brown algae, Cystoseira myrica and Sargassum boveanum, collected from the Persian Gulf coast were subjected to different bioassays including: 1,1-diphenyl-2-picrylhydrazyl (DPPH) free radical scavenging assay, antibacterial and antifungal activity by thin layer chromatography (TLC)-bioautography, agar disc diffusion (ADD) ...

Abstract This study focused on characterization of Volatile Organic Compounds (VOCs) as contaminants and non-volatile additives in Italian PET bottles, also suggesting potential functional aldehydes scavengers. Several VOCs, such acetic aldehyde (AA), butanal, 3-methyl 1,3-dioxolane, pentanal, hexanal, octanal, 5-hepten-2-one, nonanal, decanal, were identified by Head Space-Gas Chromatography/M...

Two common analytical chemical problems often encountered when using chromatographic techniques in drug analysis are matrix interferences and ion suppression. Common sample preparation often involves the dilution of the sample prior to injection onto an instrument, especially for liquid chromatography-mass spectrometry (LC-MS) analyses. This practice frequently does not minimize or eliminate co...

This paper discusses the identification of kava lactones and related compounds by gas chromatography (GC) and quadrupole time-of-flight mass spectrometry (QTOFMS) with an electron ionization source. Three herbal preparations from different sources were analyzed by both GC-low-resolution MS and GC-high-resolution MS. The exact mass measurements generated with a research QTOFMS with mass accuraci...

Gas chromatography-mass spectrometry (GC-MS) is a rapid method that provides rich information on isotopomer distributions for metabolic flux analysis. First, we established a fast and reliable experimental protocol for GC-MS analysis of amino acids from total biomass hydrolyzates, and common experimental pitfalls are discussed. Second, a suitable interface for the use of mass isotopomer data is...