نتایج جستجو برای: visual dna chip

تعداد نتایج: 906673  

2012
AN Hosein S Cocciardi J Jayanthan S Song P Simpson G Chenevix-Trench

The use of formalin fixed paraffin embedded (FFPE) tissues for DNA analysis has been met with great difficulties due to the degradative effect this fixation, processing and storage has on DNA quality. The lack of a suitable protocol to enhance the quality of such degraded DNA has been a great hindrance to our ability to make full use of clinically annotated FFPE cancer tissue banks. In this rep...

2015
U Zuperl F Cus

A visual cutting chip control system is designed to automatically adjust feed rate in order to maintain constant surface roughness in ball-end milling. The proposed visual control system has a modular structure, consisting of an optical vision system (OVS), an adaptive cutting chip size-control loop for a feed servo and a surface roughness in-process prediction model. The OVS is employed to acq...

2017
Reza Ranjbar Payam Behzadi Ali Najafi Raheleh Roudi

Background A rapid, accurate, flexible and reliable diagnostic method may significantly decrease the costs of diagnosis and treatment. Designing an appropriate microarray chip reduces noises and probable biases in the final result. Objective The aim of this study was to design and construct a DNA Microarray Chip for a rapid detection and identification of 10 important bacterial agents. Meth...

Journal: :Bioinformatics 2007
Ho-Ryun Chung Dennis Kostka Martin Vingron

MOTIVATION Chromatin immunoprecipitation (ChIP) is a powerful experimental approach to identify in vivo binding sites of sequence-specific transcription factors (TFs). These experiments are designed to specifically enrich DNA fragments that are bound to the TF. Tiling arrays have become more and more popular for the identification of these DNA fragments. However, many studies showed that only a...

Journal: :Molecular cell 2012
Manuel Garber Nir Yosef Alon Goren Raktima Raychowdhury Anne Thielke Mitchell Guttman James Robinson Brian Minie Nicolas Chevrier Zohar Itzhaki Ronnie Blecher-Gonen Chamutal Bornstein Daniela Amann-Zalcenstein Assaf Weiner Dennis Friedrich James Meldrim Oren Ram Christine Cheng Andreas Gnirke Sheila Fisher Nir Friedman Bang Wong Bradley E Bernstein Chad Nusbaum Nir Hacohen Aviv Regev Ido Amit

Understanding the principles governing mammalian gene regulation has been hampered by the difficulty in measuring in vivo binding dynamics of large numbers of transcription factors (TF) to DNA. Here, we develop a high-throughput Chromatin ImmunoPrecipitation (HT-ChIP) method to systematically map protein-DNA interactions. HT-ChIP was applied to define the dynamics of DNA binding by 25 TFs and 4...

2008
Raja Jothi Suresh Cuddapah Artem Barski Kairong Cui Keji Zhao

ChIP-Seq, which combines chromatin immunoprecipitation (ChIP) with ultra high-throughput massively parallel sequencing, is increasingly being used for mapping protein-DNA interactions in-vivo on a genome scale. Typically, short sequence reads from ChIP-Seq are mapped to a reference genome for further analysis. Although genomic regions enriched with mapped reads could be inferred as approximate ...

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