نتایج جستجو برای: microbial diversity

تعداد نتایج: 290048  

2016
Yan Xie Jibiao Fan Weixi Zhu Erick Amombo Yanhong Lou Liang Chen Jinmin Fu

Heavy metal pollution is a serious global environmental problem as it adversely affects plant growth and genetic variation. It also alters the composition and activity of soil microbial communities. The objectives of this study were to determine the soil microbial diversity, bermudagrass genetic variation in Cd contaminated or uncontaminated soils from Hunan province of China, and to evaluate C...

2008
I. Ramirez

Key microbiological conversion processes do not result from the work of a single bacterial species but are performed by a wide variety of bacteria. Up till now, this microbial diversity is usually not tracked during reactor operation and mostly neglected in mathematical models. Nevertheless, experimental evidence is available that different process conditions may favor the selection of differen...

2012
Antonio Gonzalez Jesse Stombaugh Christian L. Lauber Noah Fierer Rob Knight

UNLABELLED As microbial ecologists take advantage of high-throughput analytical techniques to describe microbial communities across ever-increasing numbers of samples, the need for new analysis tools that reveal the intrinsic spatial patterns and structures of these populations is crucial. Here we present SitePainter, an interactive graphical tool that allows investigators to create or upload p...

2010
Ivana Gudelj Joshua S Weitz Tom Ferenci M Claire Horner-Devine Christopher J Marx Justin R Meyer Samantha E Forde

Trade-offs have been put forward as essential to the generation and maintenance of diversity. However, variation in trade-offs is often determined at the molecular level, outside the scope of conventional ecological inquiry. In this study, we propose that understanding the intracellular basis for trade-offs in microbial systems can aid in predicting and interpreting patterns of diversity. First...

2012
Lu Fan Kerensa McElroy Torsten Thomas

Direct sequencing of environmental DNA (metagenomics) has a great potential for describing the 16S rRNA gene diversity of microbial communities. However current approaches using this 16S rRNA gene information to describe community diversity suffer from low taxonomic resolution or chimera problems. Here we describe a new strategy that involves stringent assembly and data filtering to reconstruct...

2016
Jizhong Zhou Ye Deng Lina Shen Chongqing Wen Qingyun Yan Daliang Ning Yujia Qin Kai Xue Liyou Wu Zhili He James W Voordeckers Joy D Van Nostrand Vanessa Buzzard Sean T Michaletz Brian J Enquist Michael D Weiser Michael Kaspari Robert Waide Yunfeng Yang James H Brown

Climate warming is increasingly leading to marked changes in plant and animal biodiversity, but it remains unclear how temperatures affect microbial biodiversity, particularly in terrestrial soils. Here we show that, in accordance with metabolic theory of ecology, taxonomic and phylogenetic diversity of soil bacteria, fungi and nitrogen fixers are all better predicted by variation in environmen...

2004
R J HAYNES

Phospholipid fatty acid (PLFA) analysis was used to characterise the microbial communities in the soil under long-term pre-harvest burning of sugarcane and several other land uses, and on a long-term experiment comparing sugarcane burnt before harvest and sugarcane harvested green with retention of a trash blanket. Trends in total PLFAs (total microbial biomass) followed the order: kikuyu pastu...

Journal: :Genome research 2006
Li Weng Edward M Rubin James Bristow

Ecologists studying microbial life in the environment have recognized the enormous complexity of microbial diversity for many years, and the development of a variety of culture-independent methods, many of them coupled with high-throughput DNA sequencing, has allowed this diversity to be explored in ever-greater detail. Despite the widespread application of these new techniques to the character...

Mohamed Gharieb Mohamed Hefnawy, Osama M. Nagdi

Mesophilic bacteria, fungi and actinomycetes varied during composting cycles with high numbers in the initial and final cycles with maximal values in compost C and D, and sharply decreased in the heating cycles. Staphylococcus aureus and Bacillus subtilis were dominated at the initial composting cycle. Whereas, at maturity Bacillus subtilis was the major followed by B.badi...

Journal: :Frontiers in microbiology 2016
S. Jane Fowler Courtney R. A. Toth Lisa M. Gieg

The methanogenic biodegradation of crude oil involves the conversion of hydrocarbons to methanogenic substrates by syntrophic bacteria and subsequent methane production by methanogens. Assessing the metabolic roles played by various microbial species in syntrophic communities remains a challenge, but such information has important implications for bioremediation and microbial enhanced energy re...

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