This paper explores techniques to take advantage of the fundamental difference in structure between hidden Markov models (HMM) and hierarchical hidden Markov models (HHMM). The HHMM structure allows repeated parts of the model to be merged together. A merged model takes advantage of the recurring patterns within the hierarchy, and the clusters that exist in some sequences of observations, in or...

We present an audio chord recognition system based on a generalization of the Hidden Markov Model (HMM) in which the duration of chords is explicitly considered a type of HMM referred to as a hidden semi-Markov model, or duration-explicit HMM (DHMM). We find that such a system recognizes chords at a level consistent with the state-of-the-art systems – 84.23% on Uspop dataset at the major/minor ...

In this paper, we address the problem of realtime detection of viruses docking to nanowires, especially when multiple viruses dock to the same nano-wire. The task becomes more complicated when there is an array of nanowires coated with different antibodies, where different viruses can dock to each coated nanowire at different binding strengths. We model the array response to a viral agent as a ...