Much of our understanding about how carbon (C) is allocated in plants comes from radiocarbon (C) pulse-chase labeling experiments. However, the large amounts of C required for decay-counting mean that these studies have been restricted for the most part to mesocosm or controlled laboratory experiments. Using the enhanced sensitivity for C detection available with accelerator mass spectrometry (...

Rhizosphere microbial communities are important for phytoremediation, plant nutrition, health and metabolism. Many factors, including plant species, pH and nutritional factors influence rhizosphere micro- biology. In this study, we analysed the effects of different forms of nitrogen on the structures of rhizosphere microbial communities of E. crassipes. Using a conventional culture method wit...

Plants rarely occur in isolated systems. Bacteria can inhabit either the endosphere, the region inside the plant root, or the rhizosphere, the soil region just outside the plant root. Our goal is to understand if using genomic data and media dependent metabolic model information is better for training machine learning of predicting bacterial ecological niche than media independent models or pur...

This report is part of a serial study applying stable isotope labelling to rice microcosms to track the utilization of recently photosynthesized carbon by active microbiota in the rhizosphere. The objective of the present study was to apply phospholipid fatty acid-based stable isotope probing (PLFA-SIP) to detect the spatial variation of active microorganisms associated with rhizosphere carbon ...

AIMS This study explores nontarget effects of fungicide application on field-grown chickpea. METHODS AND RESULTS Molecular methods were used to test the effects of foliar application of fungicide on the diversity and distribution of nifH genes associated with two chickpea cultivars and their nodulation. Treatments were replicated four times in a split-plot design in the field, in 2008 and 200...

TheGerman agronomist Hiltner first defined the rhizosphere, in 1904, as the ‘effect’ of the roots of legumes on the surrounding soil, in terms of higher microbial activity because of the organic matter released by the roots. Until the end of the twentieth century, this ‘effect’ was not considered to be an ecosystem. It is interesting to make some brief observations about the size, in terms of e...

Respiration of the rhizosphere in a beech (Fagus sylvatica L.) forest was calculated by subtracting microbial respiration associated with organic matter decomposition from daily mean soil CO2 efflux. We used a semi-mechanistic soil organic matter model to simulate microbial respiration, which was validated against "no roots" data from trenched subplots. Rhizosphere respiration exhibited pronoun...

Understanding the environmental factors that shape microbial communities is crucial, especially in extreme environments, like Antarctica. Two main forces were reported to influence Antarctic soil microbes: birds and plants. Both birds and plants are currently undergoing relatively large changes in their distribution and abundance due to global warming. However, we need to clearly understand the...

The effects of rhizodeposition on soil C and N availabilities lead to substantial changes of microbial community composition and processes in the rhizosphere of plants. Under heterogeneous light, photosynthates can be translocated or shared between exposed and shaded ramets by clonal integration. Clonal integration may enhance the rhizodeposition of the shaded ramets, which further influences n...

The rhizosphere is a critical interface supporting the exchange of resources between plants and their associated soil environment. Rhizosphere microbial diversity is influenced by the physical and chemical properties of the rhizosphere, some of which are determined by the genetics of the host plant. However, within a plant species, the impact of genetic variation on the composition of the micro...