نتایج جستجو برای: xl solver

تعداد نتایج: 26616  

Journal: :Cell 2011
Caroline H. Yi Heling Pan Jan Seebacher Il-Ho Jang Sven G. Hyberts Gregory J. Heffron Matthew G. Vander Heiden Renliang Yang Fupeng Li Jason W. Locasale Hadar Sharfi Bo Zhai Ricard Rodriguez-Mias Harry Luithardt Lewis C. Cantley George Q. Daley John M. Asara Steven P. Gygi Gerhard Wagner Chuan-Fa Liu Junying Yuan

Previous experiments suggest a connection between the N-alpha-acetylation of proteins and sensitivity of cells to apoptotic signals. Here, we describe a biochemical assay to detect the acetylation status of proteins and demonstrate that protein N-alpha-acetylation is regulated by the availability of acetyl-CoA. Because the antiapoptotic protein Bcl-xL is known to influence mitochondrial metabol...

2004
Gwénolé Ars Jean-Charles Faugère Hideki Imai Mitsuru Kawazoe Makoto Sugita

This paper compares the XL algorithm with known Gröbner basis algorithms. We show that to solve a system of algebraic equations via the XL algorithm is equivalent to calculate the reduced Gröbner basis of the ideal associated with the system. Moreover we show that the XL algorithm is also a Gröbner basis algorithm which can be represented as a redundant variant of a Gröbner basis algorithm F4. ...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 1997
S Kharbanda P Pandey L Schofield S Israels R Roncinske K Yoshida A Bharti Z M Yuan S Saxena R Weichselbaum C Nalin D Kufe

Cytochrome C is a mitochondrial protein that induces apoptosis when released into the cytosol or when added to cell-free extracts. Here we show that cells that overexpress the Bcl-2-related protein Bcl-xL fail to accumulate cytosolic cytochrome C or undergo apoptosis in response to genotoxic stress. Coimmunoprecipitation studies demonstrate that Bcl-xL associates with cytochrome C. Cytochrome C...

Journal: :American journal of physiology. Regulatory, integrative and comparative physiology 2000
J M Stulak L A Juncos J A Haas J C Romero

Cross-linked hemoglobin (XL-Hb) infused into dogs increases mean arterial pressure (MAP) but decreases blood flow to the renal (RBF), mesenteric (MBF), and iliac (IBF) circulations. These actions differ markedly from dextran infusion (which increases RBF, MBF, and IBF without altering MAP) and may be due to scavenging of nitric oxide by XL-Hb. However, because the hormonal milieu regulating reg...

2011
Mi Ran Choi Dong Hoon Oh Seok Hyeon Kim Byung-Hwan Yang Jun-Seok Lee Joonho Choi Hyun-Soo Jeon Young Gyu Chai Yong-Chon Park

OBJECTIVE To analyze both differentially expressed genes and the Bcl-xL protein expression after acute and chronic treatment with fluoxetine in rat C6 glioma cells. METHODS C6 glioma cells were cultured for 24 h or 72 h after treatment with 10 µM fluoxetine, and gene expression patterns were observed using microarray and qRT-PCR. Then, cells were cultured for 6 h, 24 h, 72 h or 96 h after tre...

2015
Fen Wang Xiang Wu Zhiying Liu Guangkui Bu Xiayu Li Nanfang Qu Jin Peng Canxia Xu Shourong Shen Yi Yuan

Objective. CagA+/vacAs1+/vacAm1+ Helicobacter pylori upregulates the expression of tumor necrosis factor receptor-associated factor 1 (TRAF1), tumor necrosis factor receptor superfamily member 9 (4-1BB), and B-cell lymphoma-extra large (Bcl-xL) in human gastric epithelial cells. We investigated the correlation between cagA/vacAs1/vacAm1 and TRAF1/4-1BB/Bcl-xL expression in gastric mucosal tissu...

Journal: :The Biochemical journal 2012
Meenu N Perera Shang H Lin Yuri K Peterson Alicja Bielawska Zdzislaw M Szulc Robert Bittman Marco Colombini

The present study demonstrates the important structural features of ceramide required for proper regulation, binding and identification by both pro-apoptotic and anti-apoptotic Bcl-2 family proteins. The C-4=C-5 trans-double bond has little influence on the ability of Bax and Bcl-xL to identify and bind to these channels. The stereochemistry of the headgroup and access to the amide group of cer...

Journal: :Cancer research 2013
Dongkyoo Park Andrew T Magis Rui Li Taofeek K Owonikoko Gabriel L Sica Shi-Yong Sun Suresh S Ramalingam Fadlo R Khuri Walter J Curran Xingming Deng

Bcl-XL is a major antiapoptotic protein in the Bcl-2 family whose overexpression is more widely observed in human lung cancer cells than that of Bcl-2, suggesting that Bcl-XL is more biologically relevant and therefore a better therapeutic target for lung cancer. Here, we screened small molecules that selectively target the BH3 domain (aa 90-98) binding pocket of Bcl-XL using the UCSF DOCK 6.1 ...

Journal: :BMC Ophthalmology 2008
Spyridon K Charisis Harilaos S Ginis Georgios A Kounis Miltiadis K Tsilimbaris

BACKGROUND The purpose of this study is to evaluate the use of Tono-Pen XL in measuring IOP during the application of a suction ring in rabbit eyes with manometrically controlled IOP. METHODS Tono-Pen XL was calibrated against direct manometry in 10 rabbit eyes. A suction ring was then applied in 4 rabbit eyes and the IOP was determined manometrically during suction ring application at 350 mm...

2007
Adam Oberstein Philip D. Jeffrey Yigong Shi

Bcl-2 family proteins are key regulators of apoptosis and have recently been shown to modulate autophagy. The tumor suppressorBeclin 1has beenproposed to coordinate both apoptosis and autophagy through direct interaction with anti-apoptotic family members Bcl-2 and/or Bcl-XL. However, the molecular basis for this interaction remains enigmatic. Herewe report that Beclin 1 contains a conserved BH...

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