نتایج جستجو برای: bestkeeper

تعداد نتایج: 287  

2017
Tim Lange Sylvia Stracke Rainer Rettig Uwe Lendeckel Jana Kuhn Rabea Schlüter Volkhard Rippe Karlhans Endlich Nicole Endlich

Chronic kidney disease (CKD) is a severe disorder with an increasing incidence worldwide. An early detection may help to prevent its progression and to minimize the risk of cardiovascular diseases as one of the major comorbidities. Recently, extracellular miRNAs like urinary exosomal miRNAs became of great interest as non-invasive biomarkers which can be determined by RT-qPCR. But until now, th...

2016
Raman Bansal Priyanka Mittapelly Yuting Chen Praveen Mamidala Chaoyang Zhao Andy Michel

The brown marmorated stink bug (Halyomorpha halys) has emerged as one of the most important invasive insect pests in the United States. Functional genomics in H. halys remains unexplored as molecular resources in this insect have recently been developed. To facilitate functional genomics research, we evaluated ten common insect housekeeping genes (RPS26, EF1A, FAU, UBE4A, ARL2, ARP8, GUS, TBP, ...

2017
Yuxiang Huang Hexin Tan Jian Yu Yue Chen Zhiying Guo Guoquan Wang Qinglei Zhang Junfeng Chen Lei Zhang Yong Diao

Baphicacanthus cusia (Nees) Bremek, the plant source for many kinds of drugs in traditional Chinese medicine, is widely distributed in South China, especially in Fujian. Recent studies about B. cusia mainly focus on its chemical composition and pharmacological effects, but further analysis of the plant's gene functions and expression is required to better understand the synthesis of its effecti...

2017
Efthimia Sagri Panagiota Koskinioti Maria-Eleni Gregoriou Konstantina T. Tsoumani Yiannis C. Bassiakos Kostas D. Mathiopoulos

Real-time quantitative-PCR has been a priceless tool for gene expression analyses. The reaction, however, needs proper normalization with the use of housekeeping genes (HKGs), whose expression remains stable throughout the experimental conditions. Often, the combination of several genes is required for accurate normalization. Most importantly, there are no universal HKGs which can be used since...

Journal: :Molecules 2018
Qiuxu Liu Xiao Qi Haidong Yan Linkai Huang Gang Nie Xinquan Zhang

To select the most stable reference genes in annual ryegrass (Lolium multiflorum), we studied annual ryegrass leaf tissues exposed to various abiotic stresses by qRT-PCR and selected 11 candidate reference genes, i.e., 18S rRNA, E2, GAPDH, eIF4A, HIS3, SAMDC, TBP-1, Unigene71, Unigene77, Unigene755, and Unigene14912. We then used GeNorm, NormFinder, and BestKeeper to analyze the expression stab...

2014
Carmen Rueda-Martínez Oscar Lamas María José Mataró Juan Robledo-Carmona Gemma Sánchez-Espín Manuel Jiménez-Navarro Miguel Such-Martínez Borja Fernández

Dilatation of the ascending aorta (AAD) is a prevalent aortopathy that occurs frequently associated with bicuspid aortic valve (BAV), the most common human congenital cardiac malformation. The molecular mechanisms leading to AAD associated with BAV are still poorly understood. The search for differentially expressed genes in diseased tissue by quantitative real-time PCR (qPCR) is an invaluable ...

Journal: :International journal of molecular medicine 2014
Juan Zhang Hongju Tang Yuqing Zhang Ruyuan Deng Li Shao Yun Liu Fengying Li Xiao Wang Libin Zhou

Quantitative reverse transcription PCR (qRT-PCR) is becoming increasingly important in the effort to gain insight into the molecular mechanisms underlying adipogenesis. However, the expression profile of a target gene may be misinterpreted due to the unstable expression of the reference genes under different experimental conditions. Therefore, in this study, we investigated the expression stabi...

2014
Chunxiao Chunxiao Yang Hui Li Huipeng Pan Yabin Ma Deyong Zhang Yong Liu Zhanhong Zhang Changying Zheng Dong Chu Chunxiao Yang

Quantitative real-time PCR (qRT-PCR) is a powerful technique for measuring and evaluating gene expressions during different biological processes. To facilitate gene expression studies, normalization with respect to stable housekeeping genes (HKGs) is mandatory. T he western flower thrips, Frankliniella occidentalis (Thysanoptera: Thripidae), the main vector of Tomato spotted wilt virus (TSWV), ...

Journal: :Scientific reports 2016
Zhi-Jun Wu Chang Tian Qian Jiang Xing-Hui Li Jing Zhuang

Tea plant (Camellia sinensis) leaf is an important non-alcoholic beverage resource. The application of quantitative real time polymerase chain reaction (qRT-PCR) has a profound significance for the gene expression studies of tea plant, especially when applied to tea leaf development and metabolism. In this study, nine candidate reference genes (i.e., CsACT7, CsEF-1α, CseIF-4α, CsGAPDH, CsPP2A, ...

2017
Kenneth Gouin Kiel Peck Travis Antes Jennifer Leigh Johnson Chang Li Sharon Denise Vaturi Ryan Middleton Geoff de Couto Ann-Sophie Walravens Luis Rodriguez-Borlado Rachel Ruckdeschel Smith Linda Marbán Eduardo Marbán Ahmed Gamal-Eldin Ibrahim

Reverse transcription-quantitative polymerase chain reaction (RT-qPCR) is one of the most sensitive, economical and widely used methods for evaluating gene expression. However, the utility of this method continues to be undermined by a number of challenges including normalization using appropriate reference genes. The need to develop tailored and effective strategies is further underscored by t...

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