نتایج جستجو برای: enhancers

تعداد نتایج: 6414  

2012
Deborah I. Ritter Zhiqiang Dong Su Guo Jeffrey H. Chuang

Many conserved noncoding sequences function as transcriptional enhancers that regulate gene expression. Here, we report that protein-coding DNA also frequently contains enhancers functioning at the transcriptional level. We tested the enhancer activity of 31 protein-coding exons, which we chose based on strong sequence conservation between zebrafish and human, and occurrence in developmental ge...

Journal: :Human molecular genetics 2012
Ramon Y Birnbaum David B Everman Karl K Murphy Fiorella Gurrieri Charles E Schwartz Nadav Ahituv

Disruption of distaless homeobox 5 and 6 (Dlx5/6) in mice results in brain, craniofacial, genital, ear and limb defects. In humans, chromosomal aberrations in the DLX5/6 region, some of which do not encompass DLX5/6, are associated with split hand/foot malformation 1 (SHFM1) as well as intellectual disability, craniofacial anomalies and hearing loss, suggesting that the disruption of DLX5/6 reg...

Journal: :Nucleic acids research 1994
R Fulton B van Ness

We have examined the interactions of the enhancers of the kappa immunoglobulin light chain gene as well as the interactions of the intron, mu, and 3' alpha enhancers of the heavy chain locus in mouse. We have observed that each of the kappa enhancers is very weak in comparison with the heavy chain intron enhancer. The mouse heavy chain 3' alpha enhancer is relatively weak as well. However, two ...

2017
Felix Muerdter Łukasz M. Boryń Ashley R. Woodfin Christoph Neumayr Martina Rath Muhammad A. Zabidi Michaela Pagani Vanja Haberle Tomáš Kazmar Rui R. Catarino Katharina Schernhuber Cosmas D. Arnold Alexander Stark

The identification of transcriptional enhancers in the human genome is a prime goal in biology. Enhancers are typically predicted via chromatin marks, yet their function is primarily assessed with plasmid-based reporter assays. Here, we show that two previous observations relating to plasmid-transfection into human cells render such assays unreliable: (1) the function of the bacterial plasmid o...

2016
Michaela Willi Kyung Hyun Yoo Chaochen Wang Zlatko Trajanoski Lothar Hennighausen

Cytokines utilize the transcription factor STAT5 to control cell-specific genes at a larger scale than universal genes, with a mechanistic explanation yet to be supplied. Genome-wide studies have identified putative STAT5-based mammary-specific and universal enhancers, an opportunity to investigate mechanisms underlying their differential response to cytokines. We have now interrogated the inte...

Journal: :Cell 2013
Axel Visel Leila Taher Hani Girgis Dalit May Olga Golonzhka Renee V. Hoch Gabriel L. McKinsey Kartik Pattabiraman Shanni N. Silberberg Matthew J. Blow David V. Hansen Alex S. Nord Jennifer A. Akiyama Amy Holt Roya Hosseini Sengthavy Phouanenavong Ingrid Plajzer-Frick Malak Shoukry Veena Afzal Tommy Kaplan Arnold R. Kriegstein Edward M. Rubin Ivan Ovcharenko Len A. Pennacchio John L.R. Rubenstein

The mammalian telencephalon plays critical roles in cognition, motor function, and emotion. Though many of the genes required for its development have been identified, the distant-acting regulatory sequences orchestrating their in vivo expression are mostly unknown. Here, we describe a digital atlas of in vivo enhancers active in subregions of the developing telencephalon. We identified more th...

2017
Je Yeong Ko Sumin Oh Kyung Hyun Yoo

Tissue-specific transcription is critical for normal development, and abnormalities causing undesirable gene expression may lead to diseases such as cancer. Such highly organized transcription is controlled by enhancers with specific DNA sequences recognized by transcription factors. Enhancers are associated with chromatin modifications that are distinct epigenetic features in a tissue-specific...

Journal: :Cell 2015
Janusz Puc Piotr Kozbial Wenbo Li Yuliang Tan Zhijie Liu Tom Suter Kenneth A. Ohgi Jie Zhang Aneel K. Aggarwal Michael G. Rosenfeld

The discovery that enhancers are regulated transcription units, encoding eRNAs, has raised new questions about the mechanisms of their activation. Here, we report an unexpected molecular mechanism that underlies ligand-dependent enhancer activation, based on DNA nicking to relieve torsional stress from eRNA synthesis. Using dihydrotestosterone (DHT)-induced binding of androgen receptor (AR) to ...

Journal: :EMBO reports 2012
Chin-Tong Ong Victor G Corces

Enhancers are regulatory DNA elements that dictate the spatial and temporal patterns of gene expression during development. Recent evidence suggests that the distinct chromatin features of enhancer regions provide the permissive landscape required for the differential access of diverse signalling molecules that drive cell-specific gene expression programmes. The epigenetic patterning of enhance...

Journal: :Journal of immunology 2014
Sarah P Collier Melodie A Henderson John T Tossberg Thomas M Aune

Long noncoding RNAs (lncRNAs), critical regulators of protein-coding genes, are likely to be coexpressed with neighboring protein-coding genes in the genome. How the genome integrates signals to achieve coexpression of lncRNA genes and neighboring protein-coding genes is not well understood. The lncRNA Tmevpg1 (NeST, Ifng-AS1) is critical for Th1-lineage-specific expression of Ifng and is coexp...

نمودار تعداد نتایج جستجو در هر سال

با کلیک روی نمودار نتایج را به سال انتشار فیلتر کنید