BACKGROUND The study aimed to explore the sensitivity and specificity of a novel fast 16S rDNA PCR and sequencing assay for the improved diagnosis of infective endocarditis (IE) in patients with suspected native or prosthetic heart valve (HV) infection over a multi-year period at our cardiovascular center. METHODS Sixty-eight patients were prospectively enrolled who underwent HV replacement f...

The phylogenetic relationships of Enterobacter sakazakii strains were investigated using 16S ribosomal DNA (rDNA) and hsp60 sequencing. Each analysis distributed E. sakazakii strains among four clusters, indicating substantial taxonomic heterogeneity. The E. sakazakii type strain 16S rDNA sequence was 97.8% similar to that of Citrobacter koseri but 97.0% similar to that of Enterobacter cloacae.

In an attempt to clarify the taxonomy of the Mycobacterium avium complex, the relationship between IS1245 RFLP, growth temperature, 16S rDNA signature sequences and the 16S-23S rDNA internally transcribed spacer (ITS) of 160 M. avium-complex isolates from different sources was investigated. All 70 isolates identified as M. avium by INNO-LiPA MYCOBACTERIA (Innogenetics, Belgium), a DNA probe tes...

15 The genetic diversity of Frankia strains nodulating Alnus glutinosa along the basin of the Tormes River was 16 studied on DNA extracted directly from nodules. Frankia strains inhabiting root nodules at 12 different 17 locations, ranging in altitude from 409 to 1181 m, were characterized. For that, we amplified the whole IGS 18 region between 16S–23S rDNA and performed a restriction fragment ...

Background: Coastal areas have a high bacterial diversity, which can be used as source of pharmaceutical substances, including the fibrinolytic enzyme. Fibrinolytic enzymes lyse blood clots by degrading fibrin. These are important for treating circulatory disorders, e.g., pulmonary embolism, deep vein thrombosis, and myocardial infarction. Objective: This study aimed to determine activity crude...

We report isolation of Francisella novicida-causing bacteremia in a woman from Thailand who was receiving chemotherapy for ovarian cancer. The organism was isolated from blood cultures and identified by 16S rDNA and PPIase gene analyses. Diagnosis and treatment were delayed due to unawareness of the disease in this region.

A total of 200 moribund rainbow trout with clinical signs of a hyperacute haemorrhagic septicemia were collected from rainbow trout farms in Fars, Kohkiloyeh-Boyer Ahmad and Charmohal-Bakhtiari provinces in the south and southwest of Iran during summer 2002 to winter 2008 for detection of Lactococcus garvieae, the causative agent of lactococcosis. Fish kidney samples were cultured aseptically o...

ABSTRACT: The aim of this study was to molecularly identify different species Aeromonas isolated from farmed tambaqui (Colossoma macropomum) North Brazil, and evaluate their pathogenic potential by the presence virulence genes. From extraction bacterial DNA, PCR (polymerase chain reaction) primers 16S rDNA, aerA (cytolytic enterotoxin), ast (cytotoxic enterotoxin) act were performed. Of 24 isol...

Sequence analyses of the 16S rDNA gene and DNA-DNA hybridization tests were performed for identification of the species of the probiotic Lactobacillus UFV H2b20 strain. Using these two tests, we concluded that this strain, originally considered Lact. acidophilus, should be classified as Lact. delbrueckii.