This article introduces a new interface for T-Coffee, a consistency-based multiple sequence alignment program. This interface provides an easy and intuitive access to the most popular functionality of the package. These include the default T-Coffee mode for protein and nucleic acid sequences, the M-Coffee mode that allows combining the output of any other aligners, and template-based modes of T...

Coffee is one of the most important plantation crops, grown in about 80 countries across the world. The genus Coffea comprises approximately 100 species of which only two species, that is, Coffea arabica (commonly known as arabica coffee) and Coffea canephora (known as robusta coffee), are commercially cultivated. Genetic improvement of coffee through traditional breeding is slow due to the per...

Coffee is a rich source of dietary antioxidants, and this property, coupled with the fact that coffee is one of the world's most popular beverages, has led to the understanding that coffee is a major contributor to dietary antioxidant intake. Brewed coffee is a complex food matrix with numerous phytochemical components that have antioxidant activity capable of scavenging free radicals, donating...

Coffee has been known to have both beneficial and harmful effects upon health. Coffee is one of the most widely consumed beverages, worldwide. Dementia/Alzheimer's disease (AD) and cardiovascular disease (CVD) are public health problems that are rapidly increasing in the aging population. Due to the high consumption of coffee, even small effects on an individual's health could have a large effe...

A cup of coffee contains mutagens which produce about 5 X 10(4)-10(5) revertants of Salmonella typhimurium TA 100 without S9 mix. One of the mutagens was identified to be methylglyoxal. Methylglyoxal was present in various beverages such as black tea, whisky, and brandy. Methylglyoxal itself induced tumors in rats when administered by subcutaneous injection. However, the mutagenic properties of...

Respiratory symptoms and lung function were studied in nine coffee workers who complained of job related respiratory symptoms. Six described symptoms characteristic of occupational asthma. Lung function data showed obstructive changes mostly in the smaller airways with no impairment in diffusing capacity. Bronchoprovocation testing with green coffee allergen provoked immediate asthmatic reactio...

The present study aimed to identify the most important packaging attributes for purchasing a product not currently on the Brazilian market: antioxidant-rich instant coffee, a blend of roasted coffee and green coffee. Five package types of the same brand of instant antioxidant-rich coffee marketed in different countries were evaluated through a focus group. The attributes’ glass shape, glass lid...

Background: Coffee contains thousands of chemical compounds such as chlorogenic acid, caffeine, potassium, niacin, magnesium and tocopherols. Only caffeine in coffee shows pharmacological effects. Based on relevant studies, caffeine in coffee has many side effects such as increasing blood pressure, homocysteine, plasma renin; catecholamine and arrhythmia, which are considered as risk factors fo...

The Malaysian Food Regulations 1985 [1] states that coffee mixtures must contain not less than 50 percent coffee. Caffeine content of a coffee mixture is usually used to indicate its coffee level. In this study, coffee content of coffee mixtures was determined based on caffeine concentrations using High Performance Liquid Chromatography (HPLC). Caffeine recoveries from spiked standard coffee mi...

in bone density. 6) Therefore, to reduce risk of osteoporosis, adequate calcium and vitamin D intake, as well as moderate coffee consumption (up to 3 cups/d) is advised particularly in older adults. Michaelsson K. Long-term coffee consumption in relation to fracture risk and bone mineral density in women. Am J Coffee may be the most widely consumed beverage in the world. Coffee contains many co...