نتایج جستجو برای: double strand break dsb

تعداد نتایج: 297593  

2016
Wenyuan Wang Tonis Org Amélie Montel-Hagen Peter D. Pioli Dan Duan Edo Israely Daniel Malkin Trent Su Johanna Flach Siavash K. Kurdistani Robert H. Schiestl Hanna K. A. Mikkola

DNA double strand break (DSB) repair is critical for generation of B-cell receptors, which are pre-requisite for B-cell progenitor survival. However, the transcription factors that promote DSB repair in B cells are not known. Here we show that MEF2C enhances the expression of DNA repair and recombination factors in B-cell progenitors, promoting DSB repair, V(D)J recombination and cell survival....

2015
Gunther Boysen Christopher E Barbieri Davide Prandi Mirjam Blattner Sung-Suk Chae Arun Dahija Srilakshmi Nataraj Dennis Huang Clarisse Marotz Limei Xu Julie Huang Paola Lecca Sagar Chhangawala Deli Liu Pengbo Zhou Andrea Sboner Johann S de Bono Francesca Demichelis Yariv Houvras Mark A Rubin Joaquín M Espinosa

Genomic instability is a fundamental feature of human cancer often resulting from impaired genome maintenance. In prostate cancer, structural genomic rearrangements are a common mechanism driving tumorigenesis. However, somatic alterations predisposing to chromosomal rearrangements in prostate cancer remain largely undefined. Here, we show that SPOP, the most commonly mutated gene in primary pr...

2017
Supriya Sinha Fuyang Li Diana Villarreal Jae Hoon Shim Suhyeon Yoon Kyungjae Myung Eun Yong Shim Sang Eun Lee

Microhomology (MH) flanking a DNA double-strand break (DSB) drives chromosomal rearrangements but its role in mutagenesis has not yet been analyzed. Here we determined the mutation frequency of a URA3 reporter gene placed at multiple locations distal to a DSB, which is flanked by different sizes (15-, 18-, or 203-bp) of direct repeat sequences for efficient repair in budding yeast. Induction of...

Journal: :PLoS Genetics 2008
Nicole Bennardo Anita Cheng Nick Huang Jeremy M. Stark

Characterizing the functional overlap and mutagenic potential of different pathways of chromosomal double-strand break (DSB) repair is important to understand how mutations arise during cancer development and treatment. To this end, we have compared the role of individual factors in three different pathways of mammalian DSB repair: alternative-nonhomologous end joining (alt-NHEJ), single-strand...

2010
Michal Hammel Yaping Yu Brandi L. Mahaney Brandon Cai Ruiqiong Ye Barry M. Phipps Robert P. Rambo Greg L. Hura Martin Pelikan Sairei So Ramin M. Abolfath David J. Chen Susan P. Lees-Miller John A. Tainer

DNA double strand break (DSB) repair by non-homologous end joining (NHEJ) is initiated by DSB detection by Ku70/80 (Ku) and DNA-dependent protein kinase catalytic subunit (DNA-PKcs) recruitment, which promotes pathway progression through poorly defined mechanisms. Here, Ku and DNA-PKcs solution structures alone and in complex with DNA, defined by x-ray scattering, reveal major structural reorga...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2013
Farokh Dotiwala Vinay V Eapen Jacob C Harrison Ayelet Arbel-Eden Vikram Ranade Satoshi Yoshida James E Haber

Budding yeast cells suffering a single unrepaired double-strand break (DSB) trigger the Mec1 (ATR)-dependent DNA damage response that causes them to arrest before anaphase for 12-15 h. Here we find that hyperactivation of the cytoplasm-to-vacuole (CVT) autophagy pathway causes the permanent G2/M arrest of cells with a single DSB that is reflected in the nuclear exclusion of both Esp1 and Pds1. ...

Journal: :Science 2013
Michal Zimmermann Francisca Lottersberger Sara B Buonomo Agnel Sfeir Titia de Lange

The choice between double-strand break (DSB) repair by either homology-directed repair (HDR) or nonhomologous end joining (NHEJ) is tightly regulated. Defects in this regulation can induce genome instability and cancer. 53BP1 is critical for the control of DSB repair, promoting NHEJ, and inhibiting the 5' end resection needed for HDR. Using dysfunctional telomeres and genome-wide DSBs, we ident...

2007
Dorothee Deckbar Julie Birraux Andrea Krempler Leopoldine Tchouandong Andrea Beucher Sarah Walker Tom Stiff Penny Jeggo Markus Löbrich

DNA double-strand break (DSB) repair and checkpoint control represent distinct mechanisms to reduce chromosomal instability. Ataxia telangiectasia (AT) cells have checkpoint arrest and DSB repair defects. Here, we examine the efficiency and interplay of ATM's G2 checkpoint and repair functions. Artemis cells manifest an identical and epistatic repair defect to AT but show proficient checkpoint ...

2018
Sangita Pal Spike D Postnikoff Myrriah Chavez Jessica K Tyler

The causal relationship between genomic instability and replicative aging is unclear. We reveal here that genomic instability at the budding yeast ribosomal DNA (rDNA) locus increases during aging, potentially due to the reduced cohesion that we uncovered during aging caused by the reduced abundance of multiple cohesin subunits, promoting increased global chromosomal instability. In agreement, ...

2016
Jonathan L. Schmid-Burgk Klara Höning Thomas S. Ebert Veit Hornung

The site-specific insertion of heterologous genetic material into genomes provides a powerful means to study gene function. Here we describe a modular system entitled CRISPaint (CRISPR-assisted insertion tagging) that allows precise and efficient integration of large heterologous DNA cassettes into eukaryotic genomes. CRISPaint makes use of the CRISPR-Cas9 system to introduce a double-strand br...

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