This paper presents an interactive web-based cross-sectional anatomy navigation system based on the high-resolution Chinese Visible Human (CVH) dataset. Compared with previous web-based anatomy learning systems, the proposed system has three new features. First, we exploit recently released WebGL API, which supports direct access to the Graphic Processing Units (GPUs) from the browser, to achie...

Network coding has recently been widely applied in various distributed systems for throughput improvement and/or resilience to network dynamics. However, the computational overhead introduced by network coding operations is not negligible and has become the obstacle for practical deployment of network coding. In this paper, we exploit the computing power of commodity many-core Graphic Processin...

The importance of simulation software in current and future evolutionary and genomic studies is just confirmed by the recent publication of several new simulation tools. The forward-in-time simulation strategy has, therefore, re-emerged as a complement of coalescent simulation. Additionally, more efficient coalescent algorithms, the same as new ideas about the combined use of backward and forwa...

Solving problems in bioinformatics often needs extensive computational power. Current trends in processor architecture, especially massive multi-core processors for graphic cards, combine a large number of cores into a single chip to improve the overall performance. The Compute Unified Device Architecture (CUDA) provides programming interfaces to make full use of the computing power of graphics...

One of the main hurdles standing in the way of optimal cleaning of cotton lint isthe lack of sensing systems that can react fast enough to provide the control system withreal-time information as to the level of trash contamination of the cotton lint. This researchexamines the use of programmable graphic processing units (GPU) as an alternative to thePC's traditional use of the central processin...

Coarse grain (CG) molecular models have been proposed to simulate complex systems with lower computational overheads and longer timescales with respect to atomistic level models. However, their acceleration on parallel architectures such as graphic processing units (GPUs) presents original challenges that must be carefully evaluated. The objective of this work is to characterize the impact of C...

We present a novel software package for the problem "reconstruction from projections" in electron microscopy. The Ettention framework consists of a set of modular building-blocks for tomographic reconstruction algorithms. The well-known block iterative reconstruction method based on Kaczmarz algorithm is implemented using these building-blocks, including adaptations specific to electron tomogra...