We have studied the dynamics of chloride and potassium ions in the interior of the Outer membrane porin F (OmpF) under the influence of an external electric field. From the results of extensive all-atom molecular dynamics (MD) simulations of the system, we computed several first-passage-time (FPT) quantities to characterize the dynamics of the ions in the interior of the channel. Such FPT quant...

The sedimentation of quaternized poly(4-vinyl pyridine) (QP4VP) or poly(N-methyl 4-vinyl pyridine iodide) in aqueous solution has been investigated by using an analytical ultracentrifuge (AUC) via sedimentation velocity (SV). When NaI is introduced, either the sedimentation coefficient (s) or apparent molar mass (Mw) of QP4VP increases with NaI concentration because the polyelectrolyte chains a...

Tobacco peroxidase (36 kDa, pI 3.5) exhibits unique catalytic and spectral properties that are modulated by pH, calcium and magnesium ions. It catalyses the oxidation of veratryl alcohol by hydrogen peroxide over a wide pH range (1.5-5.0) in the presence of these metal ions with a pH optimum of 1.8. This is the only example of a holoperoxidase described so far that is active and comparatively s...

A model-based graph matching approach is proposed for interactive image segmentation. It starts from an over-segmentation of the input image, exploiting color and spatial information among regions to propagate the labels from the regions marked by the user-provided seeds to the entire image. The region merging procedure is performed by matching two graphs: the input graph, representing the enti...

Octabromo-tetrakis(4-methylpyridyl)porphine (OBTMPyP), an octabromonated compound with 4 pyrole rings of tetrakis(4-methylpyridyl)porphine, selectively forms a complex with Cu2+ ions at pH 2.0. When 3.6×10(-5) mol/L OBTMPyP was added to the reaction mixture, the calibration curve showed good linearity for Cu2+ ions ranging from 0.01-2.2 µg (addition of 1.0 mL). A good coefficient of variation (...

Abstract 5 keV - energy Ne + ions are scattered from stepped InP(001)<110> surfaces in grazing incidence. The study of a surface using the ion scattering method is great interest, since at large angles. For calculated simple trajectories channeled binary collision approximation method. Calculated and angle ions, which exits this channel. It indicates that distribution observe intensively ...

We describe the design of an interactive rendering system for particle-based fluid simulations comprising hundreds of millions of particles per time step. We present a novel binary voxel representation for particle positions in combination with random jitter to drastically reduce memory and bandwidth requirements. To avoid a time-consuming preprocess and restrict the workload to what is seen, t...

We present Insight, a framework for binary program analysis and two tools provided with it: CFGRecovery and iii. Insight is intended to be a full environment for analyzing, interacting and verifying executable programs. Insight is able to translate x86, x86-64 and msp430 binary code to our intermediate representation and execute it symbolically in an abstract domain where each variable (registe...