نتایج جستجو برای: landscape preferences

تعداد نتایج: 137057  

Journal: :Biophysical journal 2012
Ariel Afek David B Lukatsky

Recent genome-wide measurements of binding preferences of ~200 transcription regulators in the vicinity of transcription start sites in yeast, have provided a unique insight into the cis-regulatory code of a eukaryotic genome. Here, we show that nonspecific transcription factor (TF)-DNA binding significantly influences binding preferences of the majority of transcription regulators in promoter ...

2016
Haris Aziz Péter Biró Serge Gaspers Ronald de Haan Nicholas Mattei Baharak Rastegari

We consider the two-sided stable matching setting in which there may be uncertainty about the agents’ preferences due to limited information or communication. We consider three models of uncertainty: (1) lottery model — in which for each agent, there is a probability distribution over linear preferences, (2) compact indifference model — for each agent, a weak preference order is specified and e...

2014
MARTIN DALLIMER

The natural environment is central to human well-being through its role in ecosystem service (ES) provision. Managing ES often requires coordination across international borders. Although this may deliver greater conservation gains than countries acting alone, we do not know whether the public supports such an international approach. Using the same questionnaire in three countries, we quantifie...

Journal: :Physical review. E, Statistical, nonlinear, and soft matter physics 2015
Michael Sheinman Ho-Ryun Chung

Positioning of nucleosomes along a eukaryotic genome plays an important role in its organization and regulation. There are many different factors affecting the location of nucleosomes. Some can be viewed as preferential binding of a single nucleosome to different locations along the DNA and some as interactions between neighboring nucleosomes. In this study, we analyze positioning of nucleosome...

Journal: :Science 2009
Gwenael Badis Michael F Berger Anthony A Philippakis Shaheynoor Talukder Andrew R Gehrke Savina A Jaeger Esther T Chan Genita Metzler Anastasia Vedenko Xiaoyu Chen Hanna Kuznetsov Chi-Fong Wang David Coburn Daniel E Newburger Quaid Morris Timothy R Hughes Martha L Bulyk

Sequence preferences of DNA binding proteins are a primary mechanism by which cells interpret the genome. Despite the central importance of these proteins in physiology, development, and evolution, comprehensive DNA binding specificities have been determined experimentally for only a few proteins. Here, we used microarrays containing all 10-base pair sequences to examine the binding specificiti...

Journal: :Geoheritage 2023

Photographs have been utilized as substitutes for on-site scenes in the assessment and evaluation of landscape’s visual quality, perspective, preference. Visual perception, preference are assessed through human eyes their judgment. However, judgement is often generally categorized expert vs. citizen. Literature searches show that expert-based dominates over citizen level judgement. There a lack...

Journal: :CoRR 2014
Marc Harper

The interrelationships of the fundamental biological processes natural selection, mutation, and stochastic drift are quantified by the entropy rate of Moran processes with mutation, measuring the long-run variation of a Markov process. The entropy rate is shown to behave intuitively with respect to evolutionary parameters such as monotonicity with respect to mutation probability (for the neutra...

2010
Keith McGreggor Maithilee Kunda Ashok K. Goel

We present a fractal technique for addressing geometric analogy problems from the Raven's Standard Progressive Matrices test of general intelligence. In this method, an image is represented fractally, capturing its inherent selfsimilarity. We apply these fractal representations to problems from the Raven's test, and show how these representations afford a new method for solving complex geometri...

2007
Michael A. Bowers Stephen F. Matter MICHAEL A. BOWERS

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