Exploration of the intermolecular binding energy in nanometer-sized small water clusters in hydrophobic solvents and its evolution with the increase in the cluster size until bulk-type geometry is reached constitute a fascinating area of research in contemporary chemical/biological physics. In this contribution we have used femtosecond/picosecond-resolved solvation dynamics and fluorescence ani...

This study applies a novel computational method to study molecular recognition for three sets of synthetic hosts: molecular clips, molecular tweezers, and a synthetic barbiturate receptor. The computed standard free energies of binding for the 12 binding reactions agree closely with experiment and provide insight into the roles of configurational entropy, preorganization, and induced fit in the...

In many environmental transport problems, organic solutes partition between immiscible phases that consist of liquid mixtures. To estimate the corresponding partition coefficients, we evaluated the efficacy of combining linear solvation energy relationships (LSERs) developed for pure 1:1 systems via application of linear solvent strength theory. In this way, existing LSERs could be extended to ...

The retention of fifty structurally different compounds has been studied using linear solvation energy relationships. Investigations were performed with the use of six various stationary phases with two mobile phases (50/50 % v/v methanol/water and 50/50 % v/v acetonitrile/water). Packing materials were home-made and functionalized with octadecyl, alkylamide, cholesterol, alkyl-phosphate and ph...

Daunomycin (or daunorubicin) is a well known anti-cancer agent. It is an anthracycline antibiotic. The use of daunomycin against neoplasms is limited due to its severe cardiotoxicity. The cytotoxicity of daunomycin can be minimized by linking it to an affinity tag. In this report, the Molecular Structure, Binding Energy (BE), Dipole Moment (DM), Gibbs Free Energy of Solvation (ΔG (solvation)) a...

A new method of analysis of the factor contributing to solvation of small molecules is described. Approximations of the energetic contributions to the entry of a molecule into water have been derived from partition coefficient data of solutes and selected derivatives from a multiplicity of solvents. These include taking separate account energy of the cost of introduction of a molecular cavity i...

This series' first installment introduced an approach to solvation dynamics focused on expressing the emission frequency shift (following electronic excitation of, and resulting charge change or redistribution in, a solute) in terms of energy fluxes, a work and power perspective. This approach, which had been previously exploited for rotational and vibrational excitation-induced energy flow, ha...

: In this work, different levels of theory containing HF, B3LYP, and MP2 with different basis sets such as 6-31G, 6-31G*, 6-311G, 6-311+G, 6-31+G*, 6-31+G are used to predict relative acidity constants of some aniline derivatives. Three different kinds of radii containing UAHF, Bondi, and Pauling are used to study how cavity forms change acidity constants. In all cases, DPCM model is used to si...

Some of the Adamantane properties were calculated in this study. Chemical shift, free energy ofsolvation, free energy of cavity formation, Henry's law constant, and other properties ofAdamantane in dry phase, three solvents and three temperatures have been calculated with Abinitio method base on density functional theory (DFT) at B3lyp/6-31g, B31yp/6-31g*, B3lyp/6-31+g* and B3lyp/6-31++g** leve...

A new charge model, called Charge Model 4 (CM4), and a new continuum solvent model, called Solvation Model 6 (SM6), are presented. Using a database of aqueous solvation free energies for 273 neutrals, 112 ions, and 31 ion-water clusters, parameter sets for the mPW0 hybrid density functional of Adamo and Barone (Adamo, C.; Barone, V. J. Chem. Phys. 1998, 108, 664-675) were optimized for use with...