نتایج جستجو برای: protein thermodynamics

تعداد نتایج: 1260859  

Journal: :The Journal of chemical physics 2011
Kiran Girdhar Gregory Scott Yann R Chemla Martin Gruebele

Protein stability is measured by denaturation: When solvent conditions are changed (e.g., temperature, denaturant concentration, or pH) the protein population switches between thermodynamic states. The resulting denaturation curves have baselines. If the baselines are steep, nonlinear, or incomplete, it becomes difficult to characterize protein denaturation. Baselines arise because the chromoph...

Journal: :Current opinion in structural biology 1996
K W Plaxco C M Dobson

Many of the biophysical techniques developed to characterize native proteins at equilibrium have now been adapted to the structural and thermodynamic characterization of transient intermediate populations during protein folding. Recent advances in these techniques, the use of novel methods of initiating refolding, and a convergence of theoretical and experimental approaches are leading to a det...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2000
U Bastolla M Vendruscolo E W Knapp

We present a method for deriving energy functions for protein folding by maximizing the thermodynamic average of the overlap with the native state. The method has been tested by using the pairwise contact approximation of the energy function and generating alternative structures by threading sequences over a database of 1, 169 structures. With the derived energy function, most native structures...

Journal: :Biochimica et Biophysica Acta (BBA) - General Subjects 2016

2016
Tian Li Zhengjun Cheng Lijun Cao Xiaohui Jiang Lei Fan

In this data article, the fluorescence, UV-vis absorption and FTIR spectra data of BSA-AR1/AG50 system were presented, which were used for obtaining the binding characterization (such as binding constant, binding distance, binding site, thermodynamics, and structural stability of protein) between BSA and AR1/AG50.

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2012
Jin Wang Ronaldo J Oliveira Xiakun Chu Paul C Whitford Jorge Chahine Wei Han Erkang Wang José N Onuchic Vitor B P Leite

The energy landscape approach has played a fundamental role in advancing our understanding of protein folding. Here, we quantify protein folding energy landscapes by exploring the underlying density of states. We identify three quantities essential for characterizing landscape topography: the stabilizing energy gap between the native and nonnative ensembles δE, the energetic roughness ΔE, and t...

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