نتایج جستجو برای: rdna gene

تعداد نتایج: 1148794  

2013
Karina Zillner Michael Filarsky Katrin Rachow Michael Weinberger Gernot Längst Attila Németh

The DNase I accessibility and chromatin organization of genes within the nucleus do correlate to their transcriptional activity. Here, we show that both serum starvation and overexpression of Tip5, a key regulator of ribosomal RNA gene (rDNA) repression, dictate DNase I accessibility, facilitate the association of rDNA with the nuclear matrix and thus regulate large-scale rDNA chromatin organiz...

Journal: :FEMS yeast research 2003
Cletus P Kurtzman Christie J Robnett

Species of Saccharomyces, Arxiozyma, Eremothecium, Hanseniaspora (anamorph Kloeckera), Kazachstania, Kluyveromyces, Pachytichospora, Saccharomycodes, Tetrapisispora, Torulaspora, and Zygosaccharomyces, as well as three related anamorphic species assigned to Candida (C. castellii, C. glabrata, C. humilis), were phylogenetically analyzed from divergence in genes of the rDNA repeat (18S, 26S, ITS)...

Journal: :Nucleic Acids Research 2006
Sabrina Grenetier Céline Bouchoux Valérie Goguel

The genomic stability of the rDNA tandem array is tightly controlled to allow sequence homogenization and to prevent deleterious rearrangements. In this report, we show that the absence of the yeast CTD kinase I (CTDK-I) complex in null mutant strains leads to a decrease in the number of tandem rDNA repeats. Reintroduction of the missing gene induces an increase of rDNA repeats to reach a copy ...

2016
Bernard J. Pope Khalid Mahmood Chol-hee Jung Daniel J. Park

DNA breakage arises during a variety of biological processes, including transcription, replication and genome rearrangements. In the context of disease, extensive fragmentation of DNA has been described in cancer cells and during early stages of neurodegeneration (Stephens et al., 2011 Stephens et al. (2011) [5]; Blondet et al., 2001 Blondet et al. (2001) [1]). Stults et al. (2009) Stults et al...

Journal: :Molecular biology and evolution 1989
I L Gonzalez R Petersen J E Sylvester

A 2,700-bp segment of human ribosomal DNA (rDNA) spacer upstream of the rRNA promoter contains a set of four Alu elements, two in the direction of rRNA transcription and two in the opposite orientation. We report and compare the sequences of these Alu elements found in three rDNA clones and seek to determine the origin of the cluster, either from a single insertion followed by duplications or f...

2010
Lasse Sinkkonen Tabea Hugenschmidt Witold Filipowicz Petr Svoboda

BACKGROUND RNA silencing is a common term for pathways utilizing small RNAs as sequence-specific guides to repress gene expression. Components of the RNA silencing machinery are involved in different aspects of chromatin function in numerous organisms. However, association of RNA silencing with chromatin in mammalian cells remains unclear. METHODOLOGY/PRINCIPAL FINDINGS Immunostaining of mito...

Journal: :Fungal genetics and biology : FG & B 2009
Kerry O'Donnell Cécile Gueidan Stacy Sink Peter R Johnston Pedro W Crous Anthony Glenn Ron Riley Nicholas C Zitomer Patrick Colyer Cees Waalwijk Theo van der Lee Antonio Moretti Seogchan Kang Hye-Seon Kim David M Geiser Jean H Juba Robert P Baayen Matthew G Cromey Sean Bithell Deanna A Sutton Kerstin Skovgaard Randy Ploetz H Corby Kistler Monica Elliott Mike Davis Brice A J Sarver

We constructed a two-locus database, comprising partial translation elongation factor (EF-1alpha) gene sequences and nearly full-length sequences of the nuclear ribosomal intergenic spacer region (IGS rDNA) for 850 isolates spanning the phylogenetic breadth of the Fusarium oxysporum species complex (FOSC). Of the 850 isolates typed, 101 EF-1alpha, 203 IGS rDNA, and 256 two-locus sequence types ...

2014
Xihong Liu Lei Zhang Gang Li Rui Qin Hong Liu

The application of nuclear rDNA ITS sequences in plant phylogeny and evolution analysis was discussed in this paper. Nuclear rDNA is an important nuclear gene fragment, which had been widely used in phylogenetic studies. The internal transcribed spacer of nuclear rDNA was divided into ITS1 and ITS2 by 5.8S rDNA. The length of ITS1 ranges from 165 bp to 298 bp in angiosperms, and the length of I...

Journal: :Journal of the American Mosquito Control Association 2004
Ui Wook Hwang Tai Soon Yong Han-Il Ree

Identification of species members of the Hyrcanus Group of Anopheles is difficult because of intraspecific variation in and interspecific similarity among key characters. Hibernating female Anopheles pullus were collected and 6 adults were individually reared. All F1 progeny of wild-caught An. pullus were morphologically identical to An. yatsushiroensis. The 5.8S rDNA-ITS2-28S rDNA region from ...

2016
Asmita Rajwar Manvika Sahgal

Phylogenetic relationship of 22 FLPs was revealed on the basis of polymorphism in three genes namely 16S rDNA, Pseudomonas-specific and rpoD gene regions. The primers for 16S rDNA, Pseudomonas-specific region and rpoD gene region were amplifying a region of 1492, 990 and 760 bp, respectively, from all the isolates investigated. The RFLP analysis of the PCR products resulted in a classification ...

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