The effect of developing chrysanthemum roots on the presence and activity of bacterial populations in the rhizosphere was examined by using culture-independent methods. Nucleic acids were extracted from rhizosphere soil samples associated with the bases of roots or root tips of plants harvested at different stages of development. PCR and reverse transcriptase (RT) PCR were used to amplify 16S r...

Maize is one of the most economically important crops in the world. Understanding how the genetics and management of this staple crop interact with local field environments is vital to securing sustainable harvests. The interface zone between the plant root and its surrounding soil, or rhizosphere, supports essential interactions between roots and local soils. These interactions include the exc...

The potential capacity of soil to sequester carbon in response to global warming is strongly regulated by the ratio of rhizosphere respiration to respiration by soil microbial decomposers, because of their different temperature sensitivities. To quantify relative contributions of rhizosphere respiration to total soil respiration as influenced by forest stand development, we conducted a trenchin...

Plant growth-promoting rhizobacteria (PGPR) are the rhizosphere bacteria that can enhance plant growth by a wide variety of mechanisms like phosphate solubilization, siderophore production, biological nitrogen fixation, rhizosphere engineering, production of 1-Aminocyclopropane-1-carboxylate deaminase (ACC), quorum sensing (QS) signal interference and inhibition of biofilm formation, phytohormo...

Understanding how microbial community composition and diversity respond to continuous cropping obstacle is not well understood. However, determining the community composition vs assessing the diversity of molecular operational taxonomic units is often difficult. In this study, we focused on the microbial diversity and niche differentiation in rhizosphere soils between healthy and diseased cotto...

Since the domestication of soybean (Glycine max) about 4,500 years ago, thousands of local cultivars have been developed around the world. In Japan, black soybeans grown in the mountainous region of central Kyoto and Hyogo prefectures, called the Tamba region, are well known for large seeds and palatability. The yields of black soybean in the Tamba region of Kyoto have decreased during the past...

The rhizosphere microbiome is regulated by plant genotype, root exudates and environment. There is substantial interest in breeding and managing crops that host root microbial communities that increase productivity. The eudicot model species Arabidopsis has been used to investigate these processes, however a model for monocotyledons is also required. We characterized the rhizosphere microbiome ...

Iron plaque occurs on the roots of most wetland and submersed aquatic plant species and is a large pool of oxidized Fe(III) in some environments. Because plaque formation in wetlands with circumneutral pH has been largely assumed to be an abiotic process, no systematic effort has been made to describe plaque-associated microbial communities or their role in plaque deposition. We hypothesized th...

appropriate management of soil phosphorus (p) fertility in highly calcareous soils of iran as around the world should rely upon sound knowledge about the phosphorus reserve and its bioavailability. despite numerous reports on the positive effects of vesicular arbuscular mycorrhizae (vam) fungi on phosphorus uptake which is associated to ectomycorrhiza as a branch of two major branches of group ...

The present study was mainly conducted to investigate the survey of arbuscular mycorrhizal biodiversity in rhizosphere soil and root colonization of medicinal plant species in Sirumalai hills, Eastern Ghats of Dindugul district, Tamilnadu. Soil samples were collected during the month of September 2014 from the surface to 30 cm depth and pH was measured. Rhizosphere soil root of 20 plant species...