Maintainer Danni Yu Depends R (>= 3.0), caTools, RColorBrewer Description The purpose of this package is to discover the genes that are differentially expressed between two conditions in RNA-seq experiments. Gene expression is measured in counts of transcripts and modeled with the Negative Binomial (NB) distribution using a shrinkage approach for dispersion estimation. The meth...

Polymer networks that can serve as model systems for dental applications were prepared by photopolymerizations of 1,1,1-trimethylolpropane triacrylate, 1,1,1-trimethylolpropane trimethacrylate, 1,1,1-trimethylolethane trimethacrylate, ethylene glycol dimethacrylate, triethylene glycol dimethacrylate, Photomer 2028 and Photomer 3015. The UV polymerizations were initiated by 2,2-dimethoxy-2-pheny...

The film shrinkage effect of photopolymeric phase media failed to provide the desired volume holograms for point-to-point optical interconnects. In this paper, we report a new compensation method to physically correct the shrinkage effect resulted from the holographic recording and the post baking. Dupont photopolymer HRF-600X001 is studied. The correction of the Bragg diffraction angle shift o...

—Body size measurements from freshly collected birds and dried museum specimens were used to evaluate specimen shrinkage in Cinnamon Teal (Anas cyanoptera). Six of seven body measurements of female Cinnamon Teal differed significantly after specimen drying, whereas five of seven male body measurements differed. The largest amount of shrinkage was in bill height, bill width, and tarsus length. B...

Polymerisation induced shrinkage is one of the main reasons why photopolymer materials are not more widely used for holographic applications. The aim of this study is to evaluate the shrinkage in an acrylamide photopolymer layer during holographic recording using holographic interferometry. Shrinkage in photopolymer layers can be measured by real time capture of holographic interferograms durin...

In this paper, we build on the literature that examines associations between height and health outcomes of the elderly. We investigate the associations of height shrinkage at older ages with socioeconomic status, finding that height shrinkage for both men and women is negatively associated with better schooling, current urban residence, and household per capita expenditures. We then investigate...

In this paper we introduce a novel kernel classifier based on a iterative shrinkage algorithm developed for compressive sensing. We have adopted Bregman iteration with soft and hard shrinkage functions and generalized hinge loss for solving l1 norm minimization problem for classification. Our experimental results with face recognition and digit classification using SVM as the benchmark have sho...

In Kuriki and Takemura (1997a) we established a general theory of James-Stein type shrinkage to convex sets with smooth boundary. In this paper we show that our results can be generalized to the case where shrinkage is toward smooth non-convex cones. A primary example of this shrinkage is descriptive principal component analysis, where one shrinks small singular values of the data matrix. Here ...

The volumetric changes in the coal matrix (Coal Shrinkage), permeability under various gas environment conditions as well as perographical properties were studied in the laboratory. The shrinkage and permeability of coal were examined with respect to changing gas type and confining pressures. The shrinkage tests were carried out in high-pressure bombs while the permeability study was conducted ...

The purpose of this study was to investigate the effect of modifying aluminum oxide slips with magnesium oxide (MgO) to create a jointing material for In-Ceram Alumina. Jointed In-Ceram Alumina bars with In-Ceram Alumina slips containing 0-1.0 mass% MgO were examined by a three-point bending test. Joint-free bars were also tested as controls. Fracture surfaces were evaluated by scanning electro...