نتایج جستجو برای: snp marker

تعداد نتایج: 151631  

2014
Christine Zanke Jie Ling Jörg Plieske Sonja Kollers Erhard Ebmeyer Viktor Korzun Odile Argillier Gunther Stiewe Maike Hinze Sebastian Beier Martin W. Ganal Marion S. Röder

A genome-wide association study (GWAS) for heading date (HD) was performed with a panel of 358 European winter wheat (Triticum aestivum L.) varieties and 14 spring wheat varieties through the phenotypic evaluation of HD in field tests in eight environments. Genotyping data consisted of 770 mapped microsatellite loci and 7934 mapped SNP markers derived from the 90K iSelect wheat chip. Best linea...

2015
ShiGang Yu WeiWei Chu LiFan Zhang HouMing Han RongXue Zhao Wei Wu JiangNing Zhu Michael V. Dodson Wei Wei HongLin Liu Jie Chen Gen Hua Yue

Laying performance is an important economical trait of goose production. As laying performance is of low heritability, it is of significance to develop a marker-assisted selection (MAS) strategy for this trait. Definition of sequence variation related to the target trait is a prerequisite of quantitating MAS, but little is presently known about the goose genome, which greatly hinders the identi...

2015
Masahiro Nakatochi Yasunori Ushida Yoshinari Yasuda Yasuko Yoshida Shun Kawai Ryuji Kato Toru Nakashima Masamitsu Iwata Yachiyo Kuwatsuka Masahiko Ando Nobuyuki Hamajima Takaaki Kondo Hiroaki Oda Mutsuharu Hayashi Sawako Kato Makoto Yamaguchi Shoichi Maruyama Seiichi Matsuo Hiroyuki Honda

Although many single nucleotide polymorphisms (SNPs) have been identified to be associated with metabolic syndrome (MetS), there was only a slight improvement in the ability to predict future MetS by the simply addition of SNPs to clinical risk markers. To improve the ability to predict future MetS, combinational effects, such as SNP-SNP interaction, SNP-environment interaction, and SNP-clinica...

2017
Yongbin Qi Linyou Wang Junmei Gui Lixia Zhang Qinglong Liu Jianjun Wang

The fertility conversion of photoperiod thermo-sensitive genic male sterility (P/TGMS) lines in rice is mostly regulated by the P/TGMS genes in different environmental conditions. A point mutation with G-C on the pms3 (p/tms12-1) gene regulates the pollen fertility of Nongken58S and a large amount of Nongken58S-derived lines. In this study, we developed and designed a functional co-dominant mar...

2015
Makiko Chono Hitoshi Matsunaka Masako Seki Masaya Fujita Chikako Kiribuchi-Otobe Shunsuke Oda Hisayo Kojima Shingo Nakamura

In the wheat (Triticum aestivum L.) cultivar 'Zenkoujikomugi', a single nucleotide polymorphism (SNP) in the promoter of MOTHER OF FT AND TFL1 on chromosome 3A (MFT-3A) causes an increase in the level of gene expression, resulting in strong grain dormancy. We used a DNA marker to detect the 'Zenkoujikomugi'-type (Zen-type) SNP and examined the genotype of MFT-3A in Japanese wheat varieties, and...

Journal: :Clinical cancer research : an official journal of the American Association for Cancer Research 2009
Joanne P Lagmay Wendy B London Thomas G Gross Amanda Termuhlen Nicholas Sullivan Amy Axel Bethany Mundy Mark Ranalli Jason Canner Patrick McGrady Brett Hall

PURPOSE Neuroblastoma is a childhood cancer of the sympathetic nervous system and many patients present with high-risk disease. Risk stratification, based on pathology and tumor-derived biomarkers, has improved prediction of clinical outcomes, but overall survival (OS) rates remain unfavorable and new therapeutic targets are needed. Some studies suggest a link between interleukin (IL)-6 and mor...

2007
I. Agrafioti Michael P. H. Stumpf

There has been widespread and growing interest in genetic markers suitable for drawing population genetic inferences about past demographic events and to detect the effects of selection. In addition to single nucleotide polymorphisms (SNPs), microsatellites (or short tandem repeats, STRs) have received great attention in the analysis of human population history. In the SNPSTR database (http://w...

2014
Hideo Matsumura Norimichi Miyagi Naoki Taniai Mai Fukushima Kazuhiko Tarora Ayano Shudo Naoya Urasaki

Momordica charantia is a monoecious plant of the Cucurbitaceae family that has both male and female unisexual flowers. Its unique gynoecious line, OHB61-5, is essential as a maternal parent in the production of F1 cultivars. To identify the DNA markers for this gynoecy, a RAD-seq (restriction-associated DNA tag sequencing) analysis was employed to reveal genome-wide DNA polymorphisms and to gen...

2012
Huixia Du Zhenmin Bao Jingjing Yan Meilin Tian Xiaoyu Mu Shi Wang Wei Lu

Single nucleotide polymorphisms (SNPs) are currently the marker of choice in a variety of genetic studies. Using the high resolution melting (HRM) genotyping approach, 101 gene-based SNP markers were developed for Apostichopus japonicus, a sea cucumber species with economic significance for the aquaculture industry in East Asian countries. HRM analysis revealed that all the loci showed polymorp...

Journal: :The Journal of heredity 2012
Yangyong Zhang Zhiyuan Fang Qingbiao Wang Yumei Liu Limei Yang Mu Zhuang Peitian Sun

Chloroplast simple sequence repeats amplicons in 5 subspecies of Brassica oleracea were sequenced, and one chloroplast SNP was detected in amplicon ACP43. Through the introduction of an RsaI recognition site by adding one mismatch in the forward primer, combined with the increased primer length and raised annealing temperature, the dCAPS (derived cleaved amplified polymorphic sequences) marker ...

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