نتایج جستجو برای: trnd atpb

تعداد نتایج: 257  

2013
Zi-Lin Chen Wei-Jie Chen Huan Chen Ying-Ying Zhou Mei-Qin Tang Meng-Qi Fu Xiao-Feng Jin

Prunus pananensis Z. L. Chen, W. J. Chen & X. F. Jin, a new species of Rosaceae from central Zhejiang, China is described and illustrated. Micromorphological characters of the indumentum on young shoots, leaves, petioles and peduncles, including scanning electron microscope [SEM] images, are provided. This new species is morphologically similar to P. schneiderianae Koehne in having its young sh...

Journal: :American journal of botany 2003
Khidir W Hilu Thomas Borsch Kai Müller Douglas E Soltis Pamela S Soltis Vincent Savolainen Mark W Chase Martyn P Powell Lawrence A Alice Rodger Evans Hervé Sauquet Christoph Neinhuis Tracey A B Slotta Jens G Rohwer Christopher S Campbell Lars W Chatrou

Plastid matK gene sequences for 374 genera representing all angiosperm orders and 12 genera of gymnosperms were analyzed using parsimony (MP) and Bayesian inference (BI) approaches. Traditionally, slowly evolving genomic regions have been preferred for deep-level phylogenetic inference in angiosperms. The matK gene evolves approximately three times faster than the widely used plastid genes rbcL...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 1999
A W Coleman

Sequence analysis based on multiple isolates representing essentially all genera and species of the classic family Volvocaeae has clarified their phylogenetic relationships. Cloned internal transcribed spacer sequences (ITS-1 and ITS-2, flanking the 5.8S gene of the nuclear ribosomal gene cistrons) were aligned, guided by ITS transcript secondary structural features, and subjected to parsimony ...

Journal: :American journal of botany 2009
Kenneth J Wurdack Charles C Davis

The eudicot order Malpighiales contains ∼16000 species and is the most poorly resolved large rosid clade. To clarify phylogenetic relationships in the order, we used maximum likelihood, Bayesian, and parsimony analyses of DNA sequence data from 13 gene regions, totaling 15604 bp, and representing all three genomic compartments (i.e., plastid: atpB, matK, ndhF, and rbcL; mitochondrial: ccmB, cob...

Journal: :American journal of botany 2000
S W Graham R G Olmstead

Sequences from 14 slowly evolving chloroplast genes (including three highly conserved introns) were obtained for representative basal angiosperm and seed-plant taxa, using novel primers described here. These data were combined with published sequences from atpB, rbcL, and newly obtained sequences from ndhF. Combined data from these 17 genes permit sturdy, well-resolved inference of major aspect...

Journal: :Plant physiology 1988
J Ngernprasirtsiri D Macherel H Kobayashi T Akazawa

Green mutant cells of sycamore (Acer pseudoplatanus L.), which had been selected by mutagenic treatment of the white wild type, grow photoheterotrophically in auxin-depleted culture medium. In contrast to the wild-type cells, mutant cells exhibit photosynthetic O(2)-evolution activity during their growth coincident with increases of (a) chlorophyll, (b) protein, and (c) ribulose-1,5-bisphosphat...

Journal: :Nucleic Acids Research 2006
Yunling Wang David Morse

Dinoflagellate plastid genes are believed to be encoded on small generally unigenic plasmid-like minicircles. The minicircle gene complement has reached saturation with an incomplete set of plastid genes (18) compared with typical functional plastids (60-200). While some of the missing plastid genes have recently been found in the nucleus, it is still unknown if additional genes, not located on...

Journal: :Molecular phylogenetics and evolution 2008
Michael D Pirie Aelys M Humphreys Chloe Galley Nigel P Barker G Anthony Verboom David Orlovich Suzy J Draffin Kelvin Lloyd C Marcelo Baeza Maria Negritto Eduardo Ruiz J Hugo Cota Sanchez Elizabeth Reimer H Peter Linder

Phylogeny reconstruction is challenging when branch lengths vary and when different genetic loci show conflicting signals. The number of DNA sequence characters required to obtain robust support for all the nodes in a phylogeny becomes greater with denser taxon sampling. We test the usefulness of an approach mixing densely sampled, variable non-coding sequences (trnL-F; rpl16; atpB-rbcL; ITS) w...

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