نتایج جستجو برای: comparative genomics

تعداد نتایج: 269394  

2007
Bo-Young Lee Thomas D. Kocher

Genetic linkage maps of molecular markers have facilitated the identification of quantitative trait loci (QTL) for economically important traits in a variety of cultured fish species (Tao and Boulding 2003, Cnaani et al. 2004, Reid et al. 2005). In rainbow trout, several QTLs have been identified for disease resistance (Palti et al. 1999, Ozaki et al. 2001), environmental stress tolerance (Danz...

Journal: :Science 2001
P Glaser L Frangeul C Buchrieser C Rusniok A Amend F Baquero P Berche H Bloecker P Brandt T Chakraborty A Charbit F Chetouani E Couvé A de Daruvar P Dehoux E Domann G Domínguez-Bernal E Duchaud L Durant O Dussurget K D Entian H Fsihi F García-del Portillo P Garrido L Gautier W Goebel N Gómez-López T Hain J Hauf D Jackson L M Jones U Kaerst J Kreft M Kuhn F Kunst G Kurapkat E Madueno A Maitournam J M Vicente E Ng H Nedjari G Nordsiek S Novella B de Pablos J C Pérez-Diaz R Purcell B Remmel M Rose T Schlueter N Simoes A Tierrez J A Vázquez-Boland H Voss J Wehland P Cossart

Listeria monocytogenes is a food-borne pathogen with a high mortality rate that has also emerged as a paradigm for intracellular parasitism. We present and compare the genome sequences of L. monocytogenes (2,944,528 base pairs) and a nonpathogenic species, L. innocua (3,011,209 base pairs). We found a large number of predicted genes encoding surface and secreted proteins, transporters, and tran...

2012
Sabyasachi Das Masayuki Hirano

It has become a fundamental need to have genome sequence data due to the fact that the basic process of evolution is the change in DNA sequence and genome size. Recent advances in DNA sequencing technology have facilitated the availability of quite a large number of complete genome sequences from simplest prokaryotes to higher eukaryotes. The availability of whole genome sequence data at our fi...

Journal: :Current opinion in biotechnology 2006
Michael Y Galperin Eugene Kolker

The availability of genome sequences from a variety of organisms presents an opportunity to apply this sequence information to solving the key problems of molecular biology. One of the principal roadblocks on this path is the lack of appropriate descriptors and metrics that could succinctly represent the new knowledge stemming from the genomic data. Several new metrics have recently been used i...

2009

Our knowledge of yeast genomes remains largely dominated by the extensive studies on Saccharomyces cerevisiae and the consequences of its ancestral duplication, leaving the evolution of the entire class of hemiascomycetes only partly explored. We concentrate here on five species of Saccharomycetaceae, a large subdivision of hemiascomycetes, that we call ‘‘protoploid’’ because they diverged from...

2015
Catherine E. Grueber

Genomic approaches are gathering momentum in biology and emerging opportunities lie in the creative use of comparative molecular methods for revealing the processes that influence diversity of wildlife. However, few comparative genomic studies are performed with explicit and specific objectives to aid conservation of wild populations. Here I provide a brief overview of comparative genomic appro...

Journal: :Seminars in cell & developmental biology 2007
Axel Visel James Bristow Len A Pennacchio

With the availability of genomic sequence from numerous vertebrates, a paradigm shift has occurred in the identification of distant-acting gene regulatory elements. In contrast to traditional gene-centric studies in which investigators randomly scanned genomic fragments that flank genes of interest in functional assays, the modern approach begins electronically with publicly available comparati...

Journal: :Annual review of physiology 2005
Warren Burggren Stephen Warburton

Comparative developmental physiology spans genomics to physiological ecology and evolution. Although not a new discipline, comparative developmental physiology's position at the convergence of development, physiology and evolution gives it prominent new significance. The contributions of this discipline may be particularly influential as physiologists expand beyond genomics to a true systems sy...

2016
Manuel Martinez

In recent years, the genomic sequence of numerous plant species including the main crop species has been determined. Computational tools have been developed to deal with the issue of which plant has been sequenced and where is the sequence hosted. In this mini-review, the databases for genome projects, the databases created to host species/clade projects and the databases developed to perform p...

Journal: :Current opinion in plant biology 2010
Martijn Rep H Corby Kistler

Comparative genomics is a powerful tool to infer the molecular basis of fungal pathogenicity and its evolution by identifying differences in gene content and genomic organization between fungi with different hosts or modes of infection. Through comparative analysis, pathogenicity-related chromosomes have been identified in Fusarium oxysporum and Fusarium solani that contain genes for host-speci...

نمودار تعداد نتایج جستجو در هر سال

با کلیک روی نمودار نتایج را به سال انتشار فیلتر کنید