نتایج جستجو برای: fork

تعداد نتایج: 6313  

Journal: :Ultramicroscopy 2011
A Castellanos-Gomez N Agraït G Rubio-Bollinger

We have studied the dynamics of quartz tuning fork resonators used in atomic force microscopy taking into account the mechanical energy dissipation through the attachment of the tuning fork base. We find that the tuning fork resonator quality factor changes even in the case of a purely elastic sensor-sample interaction. This is due to the effective mechanical imbalance of the tuning fork prongs...

2004
Mara E. Robu Ross B. Inman Michael M. Cox

Replication forks often stall or collapse when they encounter a DNA lesion. Fork regression is part of several major paths to the repair of stalled forks, allowing nonmutagenic bypass of the lesion. We have shown previously that Escherichia coli RecA protein can promote extensive regression of a forked DNA substrate that mimics a possible structure of a replication fork stalled at a leading str...

Journal: :The Journal of biological chemistry 2010
Narendra K Bairwa Shamsu Zzaman Bidyut K Mohanty Deepak Bastia

The replication terminator protein Fob1 of Saccharomyces cerevisiae is multifunctional, and it not only promotes polar replication fork arrest at the tandem Ter sites located in the intergenic spacer region of rDNA but also loads the NAD-dependent histone deacetylase Sir2 at Ter sites via a protein complex called RENT (regulator of nucleolar silencing and telophase exit). Sir2 is a component of...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2010
Eva Petermann Mick Woodcock Thomas Helleday

DNA replication starts at initiation sites termed replication origins. Metazoan cells contain many more potential origins than are activated (fired) during each S phase. Origin activation is controlled by the ATR checkpoint kinase and its downstream effector kinase Chk1, which suppresses origin firing in response to replication blocks and during normal S phase by inhibiting the cyclin-dependent...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2004
Gregor Krings Deepak Bastia

Replication forks are arrested at specific sequences to facilitate a variety of DNA transactions. Forks also stall at sites of DNA damage, and the regression of stalled forks without rescue can cause genetic instability. Therefore, unraveling the mechanisms of fork arrest and of rescue of stalled forks is of considerable general interest. In Schizosaccharomyces pombe, products of two mating-typ...

2014
Chia-Yeh Lin Meng-Ying Wu Sophie Gay Lisette Marjavaara Mong Sing Lai Wei-Chun Hsiao Shih-Hsun Hung Hsin-Yi Tseng Duncan Edward Wright Chen-Yi Wang Guoo-Shyng W. Hsu Didier Devys Andrei Chabes Cheng-Fu Kao Julian E. Sale

The influence of mono-ubiquitylation of histone H2B (H2Bub) on transcription via nucleosome reassembly has been widely documented. Recently, it has also been shown that H2Bub promotes recovery from replication stress; however, the underling molecular mechanism remains unclear. Here, we show that H2B ubiquitylation coordinates activation of the intra-S replication checkpoint and chromatin re-ass...

Journal: :SIAM Journal of Applied Mathematics 2011
Noemi Petra John Zweck Susan E. Minkoff Anatoliy Kosterev James H. Doty

Trace gas sensors that are compact and portable are being deployed for use in a variety of applications including disease diagnosis via breath analysis, monitoring of atmospheric pollutants and greenhouse gas emissions, control of industrial processes, and for early warning of terrorist threats. One such sensor is based on optothermal detection and uses a modulated laser source and a quartz tun...

2017
Divya Ramalingam Iyer Nicholas Rhind

Faithful duplication of the genome is a challenge because DNA is susceptible to damage by a number of intrinsic and extrinsic genotoxins, such as free radicals and UV light. Cells activate the intra-S checkpoint in response to damage during S phase to protect genomic integrity and ensure replication fidelity. The checkpoint prevents genomic instability mainly by regulating origin firing, fork p...

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