BACKGROUND Quantification cycle (Cq) and amplification efficiency (AE) are parameters mathematically extracted from raw data to characterize quantitative PCR (qPCR) reactions and quantify the copy number in a sample. Little attention has been paid to the effects of preprocessing and the use of smoothing or filtering approaches to compensate for noisy data. Existing algorithms largely are taken ...

To realize the classification of lubricating oil types using mid-infrared (MIR) spectroscopy, linear discriminant analysis (LDA) was used for dimensionality reduction spectrum data, and model established based on support vector machine (SVM). The spectra samples were pre-processed by interval selection, Savitzky–Golay smoothing, multiple scattering correction, normalization. Kennard–Stone algor...

Apart from the ordinary and the periodic Golay pairs, we define also the negaperiodic Golay pairs. (They occurred first, under a different name, in a paper of Ito.) If a Hadamard matrix is also a Toeplitz matrix, we show that it must be either cyclic or negacyclic. We investigate the construction of Hadamard (and weighing matrices) from two negacyclic blocks (2N-type). The Hadamard matrices of ...

We present a general strategy for filling the missing data of the CATS benchmark time series prediction competition. Our approach builds upon a time-symmetric embedding of this time series and the use of a one-shot forecasting for each missing value inside the gaps from distant-enough delayed and forwarded predictors. In the extrapolation region we perform standard, non-iterated forward predict...

MODerate resolution Imaging Spectroradiometer (MODIS) data are largely used in multitemporal analysis of various Earth-related phenomena, such as vegetation phenology, land use/land cover change, deforestation monitoring, and time series analysis. In general, the MODIS products used to undertake multitemporal analysis are composite mosaics of the best pixels over a certain period of time. Howev...

MOTIVATION Disease classification from molecular measurements typically requires an analysis pipeline from raw noisy measurements to final classification results. Multi capillary column-ion mobility spectrometry (MCC-IMS) is a promising technology for the detection of volatile organic compounds in the air of exhaled breath. From raw measurements, the peak regions representing the compounds have...

Although the Normalized Difference Vegetation Index (NDVI) time-series data, derived from NOAA/AVHRR, SPOT/VEGETATION, TERRA or AQUA/MODIS, has been successfully used in research regarding global environmental change, residual noise in the NDVI timeseries data, even after applying strict pre-processing, impedes further analysis and risks generating erroneous results. Based on the assumptions th...

OBJECTIVE A method for rapid analysis of the refining process of honey was developed based on near-infrared (NIR) spectroscopy. METHODS Partial least square calibration models were built for the four components after the selection of the optimal spectral pretreatment method and latent factors. RESULTS The models covered the samples of different temperatures and time points, therefore the mo...

There are several methods in assessing the traits of rice including destructive and non-destructive method. The objective of this study is to evaluate the amylose content (AC) on seven types of rice grain in Malaysia market by using the Near-Infrared (NIR) Spectroscopy. AC is one of the main criteria to determine cooked rice quality. Total of samples are 210, there are including two types of br...

Raman spectroscopy is a powerful non-destructive technique for qualitatively and quantitatively characterizing materials. However, noise often obscures interesting Raman peaks due to the inherently weak Raman signal, especially in biological samples. In this study, we develop a method based on spectral reconstruction to recover Raman spectra with low signal-to-noise ratio (SNR). The synthesis o...