نتایج جستجو برای: boltzmann surface area mm

تعداد نتایج: 1320478  

2016
Arun Bahadur Gurung Atanu Bhattacharjee Mohammad Ajmal Ali

Plants are vital source of compounds offering plethora of therapeutic effects against various ailments without much side effects. Due to wide spread prevalence and drug resistance in cancer; there is an urgent need for discovery of new anti-cancer drugs. In the present study, selected novel anti-cancer plants derived compounds (cmpd1 to cmpd15) from Himalayan region were docked with defined mol...

2015
Nhut Tran Thanh Van Hieu Nguyen Ly Le

Influenza virus H7N9 foremost emerged in China in 2013 and killed hundreds of people in Asia since they possessed all mutations that enable them to resist to all existing influenza drugs, resulting in high mortality to human. In the effort to identify novel inhibitors combat resistant strains of influenza virus H7N9; we performed virtual screening targeting the Neuraminidase (NA) protein agains...

Journal: :Transactions of the American Mathematical Society 1944

Journal: :Proceedings of the National Academy of Sciences 1945

Journal: :Physical chemistry chemical physics : PCCP 2013
Yun-Bin Cho Ji Eon Kim Jun Ho Shim Chongmok Lee Youngmi Lee

A series of hollow Pd nanoshells are prepared by employing Co nanoparticles as sacrificial templates with different concentrations of a Pd precursor (1, 6, 12, 20, and 40 mM K2PdCl4), denoted hPd-X (X: concentration of K2PdCl4 in mM unit). The synthesized hPd series are tested as a cathodic electrocatalyst for oxygen reduction reaction (ORR) in alkaline solution. The morphology and surface area...

Journal: :Biological chemistry 2013
Jagmohan S Saini Nadine Homeyer Simone Fulle Holger Gohlke

Oxazolidinone antibiotics bind to the highly conserved peptidyl transferase center in the ribosome. For developing selective antibiotics, a profound understanding of the selectivity determinants is required. We have performed for the first time technically challenging molecular dynamics simulations in combination with molecular mechanics Poisson-Boltzmann surface area (MM-PBSA) free energy calc...

Journal: :Physical review. E, Statistical, nonlinear, and soft matter physics 2002
C Manwart U Aaltosalmi A Koponen R Hilfer J Timonen

Numerical micropermeametry is performed on three-dimensional porous samples having a linear size of approximately 3 mm and a resolution of 7.5 microm. One of the samples is a microtomographic image of Fontainebleau sandstone. Two of the samples are stochastic reconstructions with the same porosity, specific surface area, and two-point correlation function as the Fontainebleau sample. The fourth...

Journal: :Journal of medicinal chemistry 2012
Haralambos Tzoupis Georgios Leonis Grigorios Megariotis Claudiu T Supuran Thomas Mavromoustakos Manthos G Papadopoulos

Human immunodeficiency virus type 1 protease (HIV-1 PR) and renin are primary targets toward AIDS and hypertension therapies, respectively. Molecular mechanics Poisson-Boltzmann surface area (MM-PBSA) free-energy calculations and inhibition assays for canagliflozin, an antidiabetic agent verified its effective binding to both proteins (ΔG(pred) = -9.1 kcal mol(-1) for canagliflozin-renin; K(i,e...

Journal: :Journal of computer-aided molecular design 2011
Haralambos Tzoupis Georgios Leonis Serdar Durdagi Varnavas D. Mouchlis Thomas M. Mavromoustakos Manthos G. Papadopoulos

The objectives of this study include the design of a series of novel fullerene-based inhibitors for HIV-1 protease (HIV-1 PR), by employing two strategies that can also be applied to the design of inhibitors for any other target. Additionally, the interactions which contribute to the observed exceptionally high binding free energies were analyzed. In particular, we investigated: (1) hydrogen bo...

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