objective(s): glioblastoma is the most lethal tumor of the central nervous system. here, we aimed to evaluate the effects of exogenous delivery of p53 and a nanoformulation of curcumin called dendrosomal curcumin (dnc), alone and in combination, on glioblastoma tumor cells. materials and methods: mtt assay was exploited to measure the viability of u87-mg cells against dnc treatment. cells were ...

introduction: at present, most recombinant proteins are produced in prokaryotes especially e coli. yeasts and cho also are used as eukaryotic hosts. leishmania tarentolae, a parasite of lizards, a member of trypanosomatidae family is one of the new systems for expression of heterologous proteins. in this system, some of the parasitic protozoa features are used in expression of mammalian protein...

The deduction of phenotypic cellular responses from the structure and behavior of complex gene regulatory networks is one of the defining challenges of systems biology. This goal will require a quantitative understanding of the modular components that constitute such networks. We pursued an integrated approach, combining theory and experiment, to analyze and describe the dynamics of an isolated...

In scientific fields such as systems biology, evaluation of the relationship between network members (vertices) is approached using a network structure. In a co-expression network, comprising genes (vertices) and gene-to-gene links (edges) representing co-expression relationships, local modular structures with tight intra-modular connections include genes that are co-expressed with each other. ...

With the advent of high-throughput technologies making large-scale gene expression data readily available, developing appropriate computational tools to process these data and distill insights into systems biology has been an important part of the "big data" challenge. Gene coexpression is one of the earliest techniques developed that is still widely in use for functional annotation, pathway an...

Quantitative empirical relationships between cell composition and growth rate played an important role in the early days of microbiology. Gradually, the focus of the field began to shift from growth physiology to the ever more elaborate molecular mechanisms of regulation employed by the organisms. Advances in systems biology and biotechnology have renewed interest in the physiology of the cell ...

Motivation Despite the potential usefulness, the association analysis of gene expression with interval times of two events has been hampered because the occurrence of events can be censored and the conventional survival analysis is not suitable to handle two censored events. However, the recent advances of multivariate survival analysis considering multiple censored events together provide an u...

the chronic exposure to elf-emf (extremely-low frequency electromagnetic field) has been shown as an effective factor at biological systems. in order to determine the possible effects of whole-body exposure to emf on plasma levels of testosterones and corticosterone, weight gain and testicular gene expression of gstt1 of male rats, the present study was performed by the following procedure: thi...

INTRODUCTION 110 PRE-PCR STEPS 111 INVENTIONS MADE IN “ABSOLUTE” QUANTIFICATION ASSAYS 112 HOW THE RELATIVE QUANTIFICATION STRATEGY CHANGED 114 WHAT ABOUT PCR EFFICIENCY? 115 ASSAY VARIANCE AND HOW TO PERFORM A PROPER NORMALIZATION 116 EXPRESSION PROFILING, qPCR BIOINFORMATICS, AND STATISTICAL ANALYSIS 117 WHAT IS NEXT IN REAL-TIME PCR? 118 GENE EXPRESSION AND MORE – THE SYSTEM BIOLOGY IDEA 120...

Developing control theory of gene regulatory networks is one of the significant topics in the field of systems biology, and it is expected to apply the obtained results to gene therapy technologies in the future. In this paper, a control method using a Boolean network (BN) is studied. A BN is widely used as a model of gene regulatory networks, and gene expression is expressed by a binary value ...