April 25, 2017 Title Bayesian Robust Inference for Differential Gene Expression Version 1.40.0 Author Raphael Gottardo Description Test for differentially expressed genes with microarray data. This package can be used with both cDNA microarrays or Affymetrix chip. The packge fits a robust Bayesian hierarchical model for testing for differential expression. Outliers are modeled explicitly using ...

In this lecture we’ll explore Random Matrix Theory by exploring an application in network analysis. In particular, we’ll examine how Random Matrix Theory can be employed to develop an efficient randomized algorithm for finding planted cliques. In doing so, we will explore a general method for analyzing random graph problems with “planted” structure by treating them as a signal reconstruction pr...

April 25, 2017 Type Package Title Gene selection based on the marginal distributions of gene profiles that characterized by a mixture of three-component multivariate distributions Version 2.20.0 Date 2012-11-14 Author Jarrett Morrow , Weiliang Qiu , Wenqing He , Xiaogang Wang , Ross Lazarus <ros...

bgAdjust Remove background Description Estimate and remove background signal using anti-genomic background probes Usage bgAdjust(dat, copy=TRUE) Arguments dat a TilingFeatureSet copy Only relevant when using disk-backed objects. If TRUE a copy will be made leaving the original object (dat) unchanged. The input object will not be preserved if copy=FALSE Details Background signal removal using a ...