This supplementary material contains technical details on the structure of the Grassmann manifold (Section A), our shooting strategy for Grassmannian geodesic regression (GGR, Section B), and the continuous piecewise GGR (Section C). The references to sections that appear in the paper [2] are marked as [Paper, §xxx]. The source code and further updates are also provided here: https://yi_hong@bi...

Non-small cell lung cancer (NSCLC) is a serious disease and has high recurrence rate after surgery. Recently, many machine learning methods have been proposed for prediction. The using gene expression data achieve accuracy rates but expensive. While, the radiomics features computer tomography (CT) image cost-effective method, their not competitive. In this paper, we propose genotype-guided meth...

Glycyrrhiza glabra residue (GGR) was efficiently subjected to concentrated phosphoric acid (PA) pretreatment with/without surfactant assistance, and promising results were obtained following separate enzymatic hydrolysis and fermentation (SHF) of the biomass. Pretreatment was carried out using 85 % PA either at 50 or 85 °C with 12.5 % solid loading for 30 min. In parallel experiments, ...

Nucleotide excision repair (NER) orchestrates the repair of helix distorting DNA damage, induced by both ultraviolet radiation (UVR) and cisplatin. There is evidence that the global genome repair (GGR) arm of NER is dysfunctional in melanoma and it is known to have limited induction in melanoma cell lines after cisplatin treatment. The aims of this study were to examine mRNA transcript levels o...

The aim of this paper is to investigate the removal of toluene from gaseous solution through Glycyrrhiza glabra root (GGR) as a waste material. The batch adsorption experiments were conducted at various conditions including contact time, adsorbate concentration, humidity, and temperature. The adsorption capacity was increased by raising the sorbent humidity up to 50 percent. The adsorption of t...

UVB exposure leads to DNA damage, which when unrepaired induces C>T transitions. These mutations are found throughout the melanoma genome, particularly in non-transcribed regions. The global genome repair (GGR) branch of nucleotide excision repair (NER) is responsible for repairing UV-induced DNA damage across non-transcribed and silent regions of the genome. This study aimed to examine the rel...

A new type of nanopore sensor design is reported for a reagent-less electrochemical biosensor with no analyte "tagging" by fluorescent molecules, nanoparticles, or other species. This sensor design involves immobilization within Au-coated nanopores of bacterial periplasmic binding proteins (bPBP), which undergo a wide-amplitude, hinge-twist motion upon ligand binding. Ligand binding thus trigge...

The archaeal enzyme geranylgeranyl reductase (GGR) catalyzes hydrogenation of carbon-carbon double bonds to produce the saturated alkyl chains of the organism's unusual isoprenoid-derived cell membrane. Enzymatic reduction of isoprenoid double bonds is of considerable interest both to natural products researchers and to synthetic biologists interested in the microbial production of isoprenoid d...

The p53 tumor-suppressor gene has been implicated in the inducible activation of excision repair of ultraviolet (UV)-induced cyclobutane pyrimidine dimers (CPDs) in human cells. Because the large T antigen (LTAg) of the simian virus 40 (SV40) binds p53 protein and can interfere with its function, it was of interest to study DNA repair in normal human fibroblasts that had been transformed by SV4...

There are two subclasses of nucleotide excision repair (NER). One is the global genomic repair (GGR) which removes lesions throughout the genome regardless of whether any specific sequence is transcribed or not. The other is the transcription-coupled repair (TCR), which removes lesions only from the transcribed DNA sequences. There are data that GGR rates depend on the chemical nature of the le...