A profile hidden Markov model (PHMM) is widely used in assigning protein sequences to protein families. In this model, the hidden states only depend on the previous hidden state and observations are independent given hidden states. In other words, in the PHMM, only the information of the left side of a hidden state is considered. However, it makes sense that considering the information of the b...

The lattice Boltzmann method (LBM) has recently become an alternative and promising computational fluid dynamics approach for simulating complex fluid flows. Despite its enormous success in many practical applications, the standard LBM is restricted to the lattice uniformity in the physical space. This is the main drawback of the standard LBM for flow problems with complex geometry. Several app...

This paper is a tutorial introduction to the present state-of-the-art in the field of security of latticebased cryptosystems. After a short introduction to lattices, we describe the main hard problems in lattice theory that cryptosystems base their security on, and we present the main methods of attacking these hard problems, based on lattice basis reduction. We show how to find shortest vector...

Statistical geometry furnishes the tool that allows the transfer of results from a lattice with finite lattice parameter to the continuum. Since lattice simulations are simpler than continuum ones, this suggests that larger scale simulations for the continuum might be more effectively carried out on a lattice with finite lattice parameter followed by the indicated transfer. We also show that a ...

This study investigates the effect of material parameters of the Gurson-Tvergaard-Needleman (GTN) model on the failure prediction of cellular structures. The effect of elastic modulus, calibration parameter of GTN model, isotropic hardening, fracture strain, and strut diameter on the load-displacement curve of a lattice structure fabricated by Selective Laser Melting (SLM) has been studied by u...

Pore network modeling uses a network of pores connected by throats to model the void space of a porous medium and tries to predict its various characteristics during multiphase flow of various fluids. In most cases, a non-realistic regular lattice of pores is used to model the characteristics of a porous medium. Although some methodologies for extracting geologically realistic irregular net...

within the effective-field theory with correlations (eft), a transverse random field spin-1 ising model on the simple cubic (z=6) lattice is studied. the phase diagrams, the behavior of critical points, transverse magnetization,  internal energy, magnetic specific heat are obtained numerically and discussed for different values of p the concentration of the random transverse field.