Class IIS restriction enzymes, a subgroup of class II, cleave DNA at a precise location outside their recognition sites, and produce overhangs of unknown sequences (1). Molecular indexing is a series of techniques designed to characterize DNA fragments by these unknown sequences (2–4). I applied this principle for description of the total mRNA population using a 3′ end cDNA fragment generated b...

due to the complex assessment of young walnut cultivars (juglansregia l.) based on morphological traits, advance molecular tools have provided a new prospect for cultivar identification and dna fingerprinting. in this study, specific molecular keys were identified for 5 iranian walnut cultivars (juglansregia l.) using 30 ssr markers. the results showed that 5 ssr markers produced polymorphic ba...

In the search for an effective DNA-typing technique for use in hospital epidemiology, the performance and convenience of a novel assay based on the fingerprinting of bacterial genomes by amplification of DNA fragments surrounding rare restriction sites (ADSRRS fingerprinting) was tested. A large number of vancomycin-resistant Enterococcus faecium (VREM) isolates from haematological ward patient...

In just a few years, molecular fingerprinting of Mycobacterium tuberculosis has provided clinicians with significant insight into the epidemiology of tuberculosis. This methodology has allowed for a new understanding of the extent of new transmission of tuberculosis among residents of various communities and within institutions. It has also allowed for differentiation between episodes of reinfe...

We describe a simplification of a highly discriminatory molecular typing method, called Vir typing, for Streptococcus pyogenes (D. Gardiner, J. Hartas, B. Currie, J. D. Mathews, D. J. Kemp, and K. S. Sriprakash, PCR Methods Appl. 4:288-293, 1995). The procedure can be completed within a day, is reproducible, and can be applied directly to colonies growing on primary culture plates, allowing rap...

1. The Importance of Biodiversity Research in the Marine Environment 2. What Questions can be Answered Using Molecular Biology Techniques? 3. Evaluating Marine Biodiversity by Sequence Analysis and Fingerprinting Methods 3.1. Sequence Analysis 3.1.1. Which Genes to Select? 3.1.2. How to Generate Sequence Data? 3.1.3. Determining Biodiversity in an Environmental Sample by Sequence Analysis 3.1.4...

DNA fingerprinting of Mycobacterium tuberculosis--a relatively new laboratory technique--offers promise as a powerful aid in the prevention and control of tuberculosis (TB). Established in 1996 by the Centers for Disease Control and Prevention (CDC), the National Tuberculosis Genotyping and Surveillance Network was a 5-year prospective, population-based study of DNA fingerprinting conducted fro...

A method for high-resolution genomic fingerprinting of the enteric pathogens Campylobacter jejuni and Campylobacter coli, based on the determination of amplified fragment length polymorphism, is described. The potential of this method for molecular epidemiological studies of these species is evaluated with 50 type, reference, and well-characterised field strains. Amplified fragment length polym...